Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB11Q9Y5F2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHB11Q9Y5F2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB11Q9Y5F2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB11Q9Y5F2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHB11Q9Y5F2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB11Q9Y5F2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB11Q9Y5F2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB11Q9Y5F2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB11Q9Y5F2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
PCDHB11Q9Y5F2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB11Q9Y5F2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PCDHB11Q9Y5F2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHB11Q9Y5F2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB11Q9Y5F2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHB11Q9Y5F2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB11Q9Y5F2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHB11Q9Y5F2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB11Q9Y5F2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB11Q9Y5F2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHB11Q9Y5F2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PCDHB11Q9Y5F2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB11Q9Y5F2 AC005363.2-201ENST00000618631 242 ntBASIC18.95■□□□□ 0.62
PCDHB11Q9Y5F2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHB11Q9Y5F2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB11Q9Y5F2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCDHB11Q9Y5F2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB11Q9Y5F2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
PCDHB11Q9Y5F2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB11Q9Y5F2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHB11Q9Y5F2 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.95■□□□□ 0.62
PCDHB11Q9Y5F2 AL158211.5-201ENST00000623583 2518 ntBASIC18.95■□□□□ 0.62
PCDHB11Q9Y5F2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB11Q9Y5F2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB11Q9Y5F2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB11Q9Y5F2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB11Q9Y5F2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB11Q9Y5F2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PCDHB11Q9Y5F2 UNC93B2-201ENST00000285383 730 ntBASIC18.94■□□□□ 0.62
PCDHB11Q9Y5F2 ARMC10P1-201ENST00000313754 855 ntBASIC18.94■□□□□ 0.62
PCDHB11Q9Y5F2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB11Q9Y5F2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB11Q9Y5F2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.94■□□□□ 0.62
PCDHB11Q9Y5F2 AL590326.2-201ENST00000625139 305 ntBASIC18.94■□□□□ 0.62
PCDHB11Q9Y5F2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHB11Q9Y5F2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB11Q9Y5F2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PCDHB11Q9Y5F2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB11Q9Y5F2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB11Q9Y5F2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB11Q9Y5F2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PCDHB11Q9Y5F2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB11Q9Y5F2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB11Q9Y5F2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB11Q9Y5F2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB11Q9Y5F2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB11Q9Y5F2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB11Q9Y5F2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB11Q9Y5F2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PCDHB11Q9Y5F2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
PCDHB11Q9Y5F2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB11Q9Y5F2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB11Q9Y5F2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDHB11Q9Y5F2 AL049597.2-201ENST00000565575 961 ntBASIC18.93■□□□□ 0.62
PCDHB11Q9Y5F2 RN7SL850P-201ENST00000579959 291 ntBASIC18.93■□□□□ 0.62
PCDHB11Q9Y5F2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDHB11Q9Y5F2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDHB11Q9Y5F2 AL445228.2-201ENST00000605589 952 ntBASIC18.93■□□□□ 0.62
PCDHB11Q9Y5F2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.93■□□□□ 0.62
PCDHB11Q9Y5F2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB11Q9Y5F2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB11Q9Y5F2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 TUBB8P6-201ENST00000436895 1288 ntBASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 AC092865.7-201ENST00000641832 219 ntBASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PCDHB11Q9Y5F2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 AC116562.4-201ENST00000641316 2276 ntBASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms