Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
PCDHB7Q9Y5E2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHB7Q9Y5E2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB7Q9Y5E2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB7Q9Y5E2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB7Q9Y5E2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHB7Q9Y5E2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB7Q9Y5E2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB7Q9Y5E2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB7Q9Y5E2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDHB7Q9Y5E2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB7Q9Y5E2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB7Q9Y5E2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDHB7Q9Y5E2 PRSS44-201ENST00000515154 1146 ntBASIC20.83■□□□□ 0.93
PCDHB7Q9Y5E2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB7Q9Y5E2 AL441883.1-201ENST00000566170 1045 ntBASIC20.83■□□□□ 0.93
PCDHB7Q9Y5E2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB7Q9Y5E2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDHB7Q9Y5E2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB7Q9Y5E2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHB7Q9Y5E2 AP000550.4-202ENST00000639755 178 ntBASIC20.83■□□□□ 0.93
PCDHB7Q9Y5E2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB7Q9Y5E2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB7Q9Y5E2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB7Q9Y5E2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB7Q9Y5E2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB7Q9Y5E2 AC007375.3-201ENST00000600936 2314 ntBASIC20.83■□□□□ 0.92
PCDHB7Q9Y5E2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.83■□□□□ 0.92
PCDHB7Q9Y5E2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB7Q9Y5E2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PCDHB7Q9Y5E2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB7Q9Y5E2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 KRT8P45-201ENST00000414328 1447 ntBASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 AL121956.5-201ENST00000625261 221 ntBASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 CLDN5-201ENST00000403084 2357 ntBASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHB7Q9Y5E2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PCDHB7Q9Y5E2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCDHB7Q9Y5E2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCDHB7Q9Y5E2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PCDHB7Q9Y5E2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB7Q9Y5E2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB7Q9Y5E2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHB7Q9Y5E2 KRT8P11-201ENST00000409686 1436 ntBASIC20.81■□□□□ 0.92
PCDHB7Q9Y5E2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB7Q9Y5E2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB7Q9Y5E2 PCED1CP-201ENST00000419887 785 ntBASIC20.81■□□□□ 0.92
PCDHB7Q9Y5E2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHB7Q9Y5E2 AL359075.1-203ENST00000462729 1002 ntBASIC20.81■□□□□ 0.92
PCDHB7Q9Y5E2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHB7Q9Y5E2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.81■□□□□ 0.92
PCDHB7Q9Y5E2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCDHB7Q9Y5E2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB7Q9Y5E2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHB7Q9Y5E2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHB7Q9Y5E2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB7Q9Y5E2 AP005212.1-201ENST00000581547 1997 ntBASIC20.81■□□□□ 0.92
PCDHB7Q9Y5E2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB7Q9Y5E2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB7Q9Y5E2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB7Q9Y5E2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB7Q9Y5E2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB7Q9Y5E2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHB7Q9Y5E2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB7Q9Y5E2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHB7Q9Y5E2 FAM86EP-206ENST00000510506 987 ntBASIC20.8■□□□□ 0.92
PCDHB7Q9Y5E2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PCDHB7Q9Y5E2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHB7Q9Y5E2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHB7Q9Y5E2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
PCDHB7Q9Y5E2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB7Q9Y5E2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PCDHB7Q9Y5E2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PCDHB7Q9Y5E2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHB7Q9Y5E2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHB7Q9Y5E2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB7Q9Y5E2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB7Q9Y5E2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB7Q9Y5E2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms