Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB9Q9Y5E1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDHB9Q9Y5E1 C1QL1P1-201ENST00000568105 661 ntBASIC19.66■□□□□ 0.74
PCDHB9Q9Y5E1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.66■□□□□ 0.74
PCDHB9Q9Y5E1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHB9Q9Y5E1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB9Q9Y5E1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB9Q9Y5E1 LINC01568-207ENST00000641790 1380 ntBASIC19.66■□□□□ 0.74
PCDHB9Q9Y5E1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB9Q9Y5E1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHB9Q9Y5E1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHB9Q9Y5E1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB9Q9Y5E1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHB9Q9Y5E1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHB9Q9Y5E1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHB9Q9Y5E1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.64■□□□□ 0.74
PCDHB9Q9Y5E1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHB9Q9Y5E1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHB9Q9Y5E1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHB9Q9Y5E1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB9Q9Y5E1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHB9Q9Y5E1 AL137013.1-201ENST00000432946 1228 ntBASIC19.64■□□□□ 0.73
PCDHB9Q9Y5E1 RBM17P1-201ENST00000453646 1190 ntBASIC19.64■□□□□ 0.73
PCDHB9Q9Y5E1 AP002982.1-201ENST00000492365 877 ntBASIC19.64■□□□□ 0.73
PCDHB9Q9Y5E1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
PCDHB9Q9Y5E1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHB9Q9Y5E1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.64■□□□□ 0.73
PCDHB9Q9Y5E1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB9Q9Y5E1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PCDHB9Q9Y5E1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB9Q9Y5E1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
PCDHB9Q9Y5E1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PCDHB9Q9Y5E1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB9Q9Y5E1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHB9Q9Y5E1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB9Q9Y5E1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHB9Q9Y5E1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB9Q9Y5E1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB9Q9Y5E1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 MIR1238-201ENST00000408483 83 ntBASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 AL158211.5-201ENST00000623583 2518 ntBASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB9Q9Y5E1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 TREX1-205ENST00000625293 1783 ntBASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 KRT18P22-201ENST00000402024 1347 ntBASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 AC113347.1-201ENST00000413321 391 ntBASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 KRT18P57-201ENST00000443599 1254 ntBASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms