Protein–RNA interactions for Protein: Q9Y223

GNE, Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase, humanhuman

Known RBP Predictions only

Length 722 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GNEQ9Y223 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
GNEQ9Y223 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
GNEQ9Y223 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.58■■□□□ 1.04
GNEQ9Y223 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.58■■□□□ 1.04
GNEQ9Y223 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
GNEQ9Y223 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
GNEQ9Y223 AP005212.1-201ENST00000581547 1997 ntBASIC21.57■■□□□ 1.04
GNEQ9Y223 AC005332.1-201ENST00000577698 1310 ntBASIC21.57■■□□□ 1.04
GNEQ9Y223 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
GNEQ9Y223 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
GNEQ9Y223 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
GNEQ9Y223 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
GNEQ9Y223 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GNEQ9Y223 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
GNEQ9Y223 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
GNEQ9Y223 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
GNEQ9Y223 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
GNEQ9Y223 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.57■■□□□ 1.04
GNEQ9Y223 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.57■■□□□ 1.04
GNEQ9Y223 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.57■■□□□ 1.04
GNEQ9Y223 AC116407.4-201ENST00000623319 1061 ntBASIC21.57■■□□□ 1.04
GNEQ9Y223 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GNEQ9Y223 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
GNEQ9Y223 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GNEQ9Y223 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
GNEQ9Y223 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GNEQ9Y223 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.56■■□□□ 1.04
GNEQ9Y223 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.56■■□□□ 1.04
GNEQ9Y223 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.56■■□□□ 1.04
GNEQ9Y223 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GNEQ9Y223 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.56■■□□□ 1.04
GNEQ9Y223 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.56■■□□□ 1.04
GNEQ9Y223 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.56■■□□□ 1.04
GNEQ9Y223 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.56■■□□□ 1.04
GNEQ9Y223 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
GNEQ9Y223 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.56■■□□□ 1.04
GNEQ9Y223 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
GNEQ9Y223 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
GNEQ9Y223 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GNEQ9Y223 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GNEQ9Y223 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
GNEQ9Y223 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.56■■□□□ 1.04
GNEQ9Y223 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
GNEQ9Y223 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
GNEQ9Y223 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
GNEQ9Y223 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.55■■□□□ 1.04
GNEQ9Y223 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.55■■□□□ 1.04
GNEQ9Y223 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.55■■□□□ 1.04
GNEQ9Y223 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.55■■□□□ 1.04
GNEQ9Y223 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.55■■□□□ 1.04
GNEQ9Y223 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.55■■□□□ 1.04
GNEQ9Y223 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.55■■□□□ 1.04
GNEQ9Y223 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GNEQ9Y223 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GNEQ9Y223 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GNEQ9Y223 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
GNEQ9Y223 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.55■■□□□ 1.04
GNEQ9Y223 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GNEQ9Y223 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.55■■□□□ 1.04
GNEQ9Y223 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.55■■□□□ 1.04
GNEQ9Y223 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GNEQ9Y223 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.54■■□□□ 1.04
GNEQ9Y223 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GNEQ9Y223 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.54■■□□□ 1.04
GNEQ9Y223 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
GNEQ9Y223 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.54■■□□□ 1.04
GNEQ9Y223 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GNEQ9Y223 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GNEQ9Y223 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GNEQ9Y223 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GNEQ9Y223 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.54■■□□□ 1.04
GNEQ9Y223 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
GNEQ9Y223 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.54■■□□□ 1.04
GNEQ9Y223 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.54■■□□□ 1.04
GNEQ9Y223 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.54■■□□□ 1.04
GNEQ9Y223 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.54■■□□□ 1.04
GNEQ9Y223 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
GNEQ9Y223 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.54■■□□□ 1.04
GNEQ9Y223 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.54■■□□□ 1.04
GNEQ9Y223 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GNEQ9Y223 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GNEQ9Y223 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
GNEQ9Y223 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.54■■□□□ 1.04
GNEQ9Y223 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GNEQ9Y223 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
GNEQ9Y223 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GNEQ9Y223 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GNEQ9Y223 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GNEQ9Y223 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.53■■□□□ 1.04
GNEQ9Y223 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GNEQ9Y223 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GNEQ9Y223 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GNEQ9Y223 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GNEQ9Y223 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GNEQ9Y223 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.53■■□□□ 1.04
GNEQ9Y223 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
GNEQ9Y223 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GNEQ9Y223 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GNEQ9Y223 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GNEQ9Y223 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms