Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP2BQ9UQN3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP2BQ9UQN3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 AC006333.2-201ENST00000607957 2099 ntBASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 MIPEPP3-201ENST00000412105 444 ntBASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 RAP2CP1-201ENST00000605103 478 ntBASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP2BQ9UQN3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 AL138781.2-201ENST00000617896 1843 ntBASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2BQ9UQN3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.64■□□□□ 0.74
CHMP2BQ9UQN3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHMP2BQ9UQN3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP2BQ9UQN3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CHMP2BQ9UQN3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.64■□□□□ 0.73
CHMP2BQ9UQN3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CHMP2BQ9UQN3 RPS2P52-201ENST00000469610 820 ntBASIC19.64■□□□□ 0.73
CHMP2BQ9UQN3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.64■□□□□ 0.73
CHMP2BQ9UQN3 AL137784.2-201ENST00000607332 1000 ntBASIC19.64■□□□□ 0.73
CHMP2BQ9UQN3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CHMP2BQ9UQN3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CHMP2BQ9UQN3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP2BQ9UQN3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CHMP2BQ9UQN3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CHMP2BQ9UQN3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP2BQ9UQN3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.64■□□□□ 0.73
CHMP2BQ9UQN3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP2BQ9UQN3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP2BQ9UQN3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP2BQ9UQN3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP2BQ9UQN3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 SDHAP1-207ENST00000440850 2000 ntBASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms