Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC022616.7-201ENST00000525383 220 ntBASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 C1QL1P1-201ENST00000568105 661 ntBASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 MYC-208ENST00000641036 567 ntBASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 SMG8-203ENST00000578922 2178 ntBASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 TSPY14P-201ENST00000303979 915 ntBASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 FAM8A6P-201ENST00000407496 1135 ntBASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 AC007663.1-201ENST00000438948 1240 ntBASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 KRT18P56-201ENST00000507275 550 ntBASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 LINC01238-205ENST00000567549 1107 ntBASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 AC011558.1-201ENST00000623459 338 ntBASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NOTCH3Q9UM47 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NOTCH3Q9UM47 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
NOTCH3Q9UM47 KRT8P17-201ENST00000453110 1448 ntBASIC14.9□□□□□ -0.02
NOTCH3Q9UM47 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NOTCH3Q9UM47 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
NOTCH3Q9UM47 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NOTCH3Q9UM47 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NOTCH3Q9UM47 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
NOTCH3Q9UM47 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.9□□□□□ -0.02
NOTCH3Q9UM47 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NOTCH3Q9UM47 ERF-202ENST00000440177 2032 ntTSL 2 BASIC14.9□□□□□ -0.02
NOTCH3Q9UM47 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NOTCH3Q9UM47 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
NOTCH3Q9UM47 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NOTCH3Q9UM47 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NOTCH3Q9UM47 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.9□□□□□ -0.02
NOTCH3Q9UM47 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NOTCH3Q9UM47 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NOTCH3Q9UM47 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NOTCH3Q9UM47 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NOTCH3Q9UM47 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 INGX-201ENST00000359239 846 ntBASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 KRT8P20-201ENST00000423953 1409 ntBASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NOTCH3Q9UM47 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 DGCR10-201ENST00000609839 495 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms