Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 AP005435.1-201ENST00000529293 1178 ntBASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
UBQLN2Q9UHD9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 IRS3P-201ENST00000223076 1006 ntBASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UBQLN2Q9UHD9 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 MIR935-201ENST00000401179 91 ntBASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 AC084018.2-201ENST00000613093 2607 ntBASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN2Q9UHD9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN2Q9UHD9 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN2Q9UHD9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.27■□□□□ 0.2
UBQLN2Q9UHD9 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.27■□□□□ 0.2
UBQLN2Q9UHD9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.27■□□□□ 0.2
UBQLN2Q9UHD9 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
UBQLN2Q9UHD9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN2Q9UHD9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN2Q9UHD9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN2Q9UHD9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN2Q9UHD9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN2Q9UHD9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.27■□□□□ 0.2
UBQLN2Q9UHD9 AC006333.2-201ENST00000607957 2099 ntBASIC16.27■□□□□ 0.2
UBQLN2Q9UHD9 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN2Q9UHD9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN2Q9UHD9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.27■□□□□ 0.2
UBQLN2Q9UHD9 AC010141.3-201ENST00000456659 717 ntBASIC16.27■□□□□ 0.2
UBQLN2Q9UHD9 AC068587.7-201ENST00000641602 218 ntBASIC16.27■□□□□ 0.2
UBQLN2Q9UHD9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.27■□□□□ 0.2
UBQLN2Q9UHD9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN2Q9UHD9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.27■□□□□ 0.2
UBQLN2Q9UHD9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.27■□□□□ 0.19
UBQLN2Q9UHD9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.19
UBQLN2Q9UHD9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms