Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 ITM2C-210ENST00000620962 501 ntBASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHRNA9Q9UGM1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CHRNA9Q9UGM1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHRNA9Q9UGM1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.64■□□□□ 0.42
CHRNA9Q9UGM1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHRNA9Q9UGM1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
CHRNA9Q9UGM1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA9Q9UGM1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA9Q9UGM1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CHRNA9Q9UGM1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.64■□□□□ 0.41
CHRNA9Q9UGM1 KRT18P29-201ENST00000397031 1267 ntBASIC17.64■□□□□ 0.41
CHRNA9Q9UGM1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA9Q9UGM1 KRASP1-201ENST00000407852 552 ntBASIC17.64■□□□□ 0.41
CHRNA9Q9UGM1 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.64■□□□□ 0.41
CHRNA9Q9UGM1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.64■□□□□ 0.41
CHRNA9Q9UGM1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.64■□□□□ 0.41
CHRNA9Q9UGM1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CHRNA9Q9UGM1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.64■□□□□ 0.41
CHRNA9Q9UGM1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CHRNA9Q9UGM1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA9Q9UGM1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA9Q9UGM1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.64■□□□□ 0.41
CHRNA9Q9UGM1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CHRNA9Q9UGM1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA9Q9UGM1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA9Q9UGM1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA9Q9UGM1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 AC133681.1-201ENST00000465482 601 ntBASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 AC124016.1-201ENST00000609552 612 ntBASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.63■□□□□ 0.41
CHRNA9Q9UGM1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA9Q9UGM1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA9Q9UGM1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA9Q9UGM1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CHRNA9Q9UGM1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA9Q9UGM1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.62■□□□□ 0.41
CHRNA9Q9UGM1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA9Q9UGM1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.62■□□□□ 0.41
CHRNA9Q9UGM1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA9Q9UGM1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA9Q9UGM1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA9Q9UGM1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.62■□□□□ 0.41
CHRNA9Q9UGM1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.62■□□□□ 0.41
CHRNA9Q9UGM1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.62■□□□□ 0.41
CHRNA9Q9UGM1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.62■□□□□ 0.41
CHRNA9Q9UGM1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.62■□□□□ 0.41
CHRNA9Q9UGM1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.62■□□□□ 0.41
CHRNA9Q9UGM1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA9Q9UGM1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA9Q9UGM1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA9Q9UGM1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.62■□□□□ 0.41
CHRNA9Q9UGM1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CHRNA9Q9UGM1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms