Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC005521.1-201ENST00000393351 872 ntBASIC17.75■□□□□ 0.43
LRFN1Q9P244 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.75■□□□□ 0.43
LRFN1Q9P244 AC113347.1-201ENST00000413321 391 ntBASIC17.75■□□□□ 0.43
LRFN1Q9P244 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.75■□□□□ 0.43
LRFN1Q9P244 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.75■□□□□ 0.43
LRFN1Q9P244 AC091390.4-202ENST00000476426 537 ntBASIC17.75■□□□□ 0.43
LRFN1Q9P244 EGLN1P1-201ENST00000531623 762 ntBASIC17.75■□□□□ 0.43
LRFN1Q9P244 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.75■□□□□ 0.43
LRFN1Q9P244 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.75■□□□□ 0.43
LRFN1Q9P244 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.75■□□□□ 0.43
LRFN1Q9P244 AC092865.7-201ENST00000641832 219 ntBASIC17.75■□□□□ 0.43
LRFN1Q9P244 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.75■□□□□ 0.43
LRFN1Q9P244 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LRFN1Q9P244 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRFN1Q9P244 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LRFN1Q9P244 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.75■□□□□ 0.43
LRFN1Q9P244 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRFN1Q9P244 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN1Q9P244 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN1Q9P244 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN1Q9P244 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN1Q9P244 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN1Q9P244 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN1Q9P244 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN1Q9P244 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN1Q9P244 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.74■□□□□ 0.43
LRFN1Q9P244 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.74■□□□□ 0.43
LRFN1Q9P244 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN1Q9P244 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.74■□□□□ 0.43
LRFN1Q9P244 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN1Q9P244 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.74■□□□□ 0.43
LRFN1Q9P244 AL137013.1-201ENST00000432946 1228 ntBASIC17.74■□□□□ 0.43
LRFN1Q9P244 MFAP1P1-201ENST00000442257 1255 ntBASIC17.74■□□□□ 0.43
LRFN1Q9P244 AC128688.1-201ENST00000487626 519 ntBASIC17.74■□□□□ 0.43
LRFN1Q9P244 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.74■□□□□ 0.43
LRFN1Q9P244 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.74■□□□□ 0.43
LRFN1Q9P244 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
LRFN1Q9P244 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.74■□□□□ 0.43
LRFN1Q9P244 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN1Q9P244 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN1Q9P244 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN1Q9P244 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LRFN1Q9P244 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.73■□□□□ 0.43
LRFN1Q9P244 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRFN1Q9P244 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.73■□□□□ 0.43
LRFN1Q9P244 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.73■□□□□ 0.43
LRFN1Q9P244 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRFN1Q9P244 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRFN1Q9P244 TSPY14P-201ENST00000303979 915 ntBASIC17.73■□□□□ 0.43
LRFN1Q9P244 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRFN1Q9P244 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
LRFN1Q9P244 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.73■□□□□ 0.43
LRFN1Q9P244 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LRFN1Q9P244 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.73■□□□□ 0.43
LRFN1Q9P244 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.73■□□□□ 0.43
LRFN1Q9P244 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.73■□□□□ 0.43
LRFN1Q9P244 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LRFN1Q9P244 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRFN1Q9P244 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.73■□□□□ 0.43
LRFN1Q9P244 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRFN1Q9P244 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRFN1Q9P244 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN1Q9P244 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.72■□□□□ 0.43
LRFN1Q9P244 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN1Q9P244 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.72■□□□□ 0.43
LRFN1Q9P244 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN1Q9P244 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LRFN1Q9P244 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN1Q9P244 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN1Q9P244 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN1Q9P244 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN1Q9P244 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN1Q9P244 AC096733.2-201ENST00000609937 1394 ntBASIC17.72■□□□□ 0.43
LRFN1Q9P244 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN1Q9P244 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.72■□□□□ 0.43
LRFN1Q9P244 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN1Q9P244 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.72■□□□□ 0.43
LRFN1Q9P244 SLC25A3P1-201ENST00000443844 931 ntBASIC17.72■□□□□ 0.43
LRFN1Q9P244 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.72■□□□□ 0.43
LRFN1Q9P244 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.72■□□□□ 0.43
LRFN1Q9P244 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN1Q9P244 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN1Q9P244 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN1Q9P244 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN1Q9P244 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN1Q9P244 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
LRFN1Q9P244 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN1Q9P244 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.72■□□□□ 0.43
LRFN1Q9P244 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
LRFN1Q9P244 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRFN1Q9P244 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRFN1Q9P244 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRFN1Q9P244 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LRFN1Q9P244 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRFN1Q9P244 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.71■□□□□ 0.43
LRFN1Q9P244 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRFN1Q9P244 TCF3P1-201ENST00000423021 1937 ntBASIC17.71■□□□□ 0.43
LRFN1Q9P244 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRFN1Q9P244 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRFN1Q9P244 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms