Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.85■□□□□ 0.93
CNTN3Q9P232 SLC25A1P4-201ENST00000567977 778 ntBASIC20.85■□□□□ 0.93
CNTN3Q9P232 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.85■□□□□ 0.93
CNTN3Q9P232 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.85■□□□□ 0.93
CNTN3Q9P232 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTN3Q9P232 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTN3Q9P232 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTN3Q9P232 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.85■□□□□ 0.93
CNTN3Q9P232 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTN3Q9P232 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNTN3Q9P232 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNTN3Q9P232 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNTN3Q9P232 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTN3Q9P232 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
CNTN3Q9P232 MFAP1P1-201ENST00000442257 1255 ntBASIC20.84■□□□□ 0.93
CNTN3Q9P232 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.84■□□□□ 0.93
CNTN3Q9P232 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.84■□□□□ 0.93
CNTN3Q9P232 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTN3Q9P232 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTN3Q9P232 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTN3Q9P232 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTN3Q9P232 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNTN3Q9P232 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.83■□□□□ 0.93
CNTN3Q9P232 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CNTN3Q9P232 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNTN3Q9P232 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CNTN3Q9P232 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CNTN3Q9P232 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNTN3Q9P232 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNTN3Q9P232 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNTN3Q9P232 TREX1-205ENST00000625293 1783 ntBASIC20.83■□□□□ 0.93
CNTN3Q9P232 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CNTN3Q9P232 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CNTN3Q9P232 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CNTN3Q9P232 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.83■□□□□ 0.93
CNTN3Q9P232 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.83■□□□□ 0.93
CNTN3Q9P232 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.83■□□□□ 0.93
CNTN3Q9P232 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.83■□□□□ 0.93
CNTN3Q9P232 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CNTN3Q9P232 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNTN3Q9P232 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
CNTN3Q9P232 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
CNTN3Q9P232 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.83■□□□□ 0.92
CNTN3Q9P232 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNTN3Q9P232 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.83■□□□□ 0.92
CNTN3Q9P232 AC125437.2-201ENST00000625180 2167 ntBASIC20.83■□□□□ 0.92
CNTN3Q9P232 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNTN3Q9P232 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNTN3Q9P232 LINC01568-207ENST00000641790 1380 ntBASIC20.83■□□□□ 0.92
CNTN3Q9P232 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.83■□□□□ 0.92
CNTN3Q9P232 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.83■□□□□ 0.92
CNTN3Q9P232 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CNTN3Q9P232 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
CNTN3Q9P232 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNTN3Q9P232 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNTN3Q9P232 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.82■□□□□ 0.92
CNTN3Q9P232 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTN3Q9P232 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CNTN3Q9P232 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.82■□□□□ 0.92
CNTN3Q9P232 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTN3Q9P232 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTN3Q9P232 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CNTN3Q9P232 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTN3Q9P232 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNTN3Q9P232 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNTN3Q9P232 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.82■□□□□ 0.92
CNTN3Q9P232 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.82■□□□□ 0.92
CNTN3Q9P232 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.82■□□□□ 0.92
CNTN3Q9P232 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.82■□□□□ 0.92
CNTN3Q9P232 C2orf69P3-201ENST00000565542 1120 ntBASIC20.82■□□□□ 0.92
CNTN3Q9P232 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.82■□□□□ 0.92
CNTN3Q9P232 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTN3Q9P232 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTN3Q9P232 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTN3Q9P232 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTN3Q9P232 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.82■□□□□ 0.92
CNTN3Q9P232 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.82■□□□□ 0.92
CNTN3Q9P232 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNTN3Q9P232 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.81■□□□□ 0.92
CNTN3Q9P232 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.81■□□□□ 0.92
CNTN3Q9P232 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNTN3Q9P232 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNTN3Q9P232 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNTN3Q9P232 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNTN3Q9P232 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.81■□□□□ 0.92
CNTN3Q9P232 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNTN3Q9P232 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNTN3Q9P232 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNTN3Q9P232 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNTN3Q9P232 TSPY14P-201ENST00000303979 915 ntBASIC20.81■□□□□ 0.92
CNTN3Q9P232 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNTN3Q9P232 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
CNTN3Q9P232 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
CNTN3Q9P232 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.81■□□□□ 0.92
CNTN3Q9P232 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.81■□□□□ 0.92
CNTN3Q9P232 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.81■□□□□ 0.92
CNTN3Q9P232 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.81■□□□□ 0.92
CNTN3Q9P232 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNTN3Q9P232 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.81■□□□□ 0.92
CNTN3Q9P232 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms