Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HPF1Q9NWY4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPF1Q9NWY4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HPF1Q9NWY4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.92■□□□□ 0.46
HPF1Q9NWY4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPF1Q9NWY4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPF1Q9NWY4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.92■□□□□ 0.46
HPF1Q9NWY4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HPF1Q9NWY4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
HPF1Q9NWY4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.92■□□□□ 0.46
HPF1Q9NWY4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.92■□□□□ 0.46
HPF1Q9NWY4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.92■□□□□ 0.46
HPF1Q9NWY4 REXO1L12P-201ENST00000622156 912 ntBASIC17.92■□□□□ 0.46
HPF1Q9NWY4 AC131212.4-201ENST00000623606 975 ntBASIC17.92■□□□□ 0.46
HPF1Q9NWY4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPF1Q9NWY4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPF1Q9NWY4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.92■□□□□ 0.46
HPF1Q9NWY4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPF1Q9NWY4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPF1Q9NWY4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
HPF1Q9NWY4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPF1Q9NWY4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPF1Q9NWY4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HPF1Q9NWY4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HPF1Q9NWY4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 LINC01521-201ENST00000504184 1943 ntBASIC17.91■□□□□ 0.46
HPF1Q9NWY4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HPF1Q9NWY4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 UNC93B2-201ENST00000285383 730 ntBASIC17.9■□□□□ 0.46
HPF1Q9NWY4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.9■□□□□ 0.46
HPF1Q9NWY4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 AC026271.3-201ENST00000571884 352 ntBASIC17.9■□□□□ 0.46
HPF1Q9NWY4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 REXO1L10P-201ENST00000615707 1290 ntBASIC17.9■□□□□ 0.46
HPF1Q9NWY4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HPF1Q9NWY4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HPF1Q9NWY4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.46
HPF1Q9NWY4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.89■□□□□ 0.46
HPF1Q9NWY4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.89■□□□□ 0.46
HPF1Q9NWY4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPF1Q9NWY4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.89■□□□□ 0.45
HPF1Q9NWY4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms