Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL1Q9NR64 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
KLHL1Q9NR64 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL1Q9NR64 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL1Q9NR64 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.19■□□□□ 0.5
KLHL1Q9NR64 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
KLHL1Q9NR64 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
KLHL1Q9NR64 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.19■□□□□ 0.5
KLHL1Q9NR64 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.19■□□□□ 0.5
KLHL1Q9NR64 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL1Q9NR64 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.19■□□□□ 0.5
KLHL1Q9NR64 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL1Q9NR64 AC004264.1-201ENST00000608354 794 ntBASIC18.19■□□□□ 0.5
KLHL1Q9NR64 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
KLHL1Q9NR64 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL1Q9NR64 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL1Q9NR64 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL1Q9NR64 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL1Q9NR64 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 TSPY15P-201ENST00000457163 923 ntBASIC18.18■□□□□ 0.5
KLHL1Q9NR64 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 BX088651.1-201ENST00000540551 451 ntBASIC18.18■□□□□ 0.5
KLHL1Q9NR64 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 AF186192.3-201ENST00000583427 947 ntBASIC18.18■□□□□ 0.5
KLHL1Q9NR64 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL1Q9NR64 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 AC120498.9-201ENST00000339021 3867 ntBASIC18.17■□□□□ 0.5
KLHL1Q9NR64 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 AC211429.1-201ENST00000415277 523 ntBASIC18.17■□□□□ 0.5
KLHL1Q9NR64 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.17■□□□□ 0.5
KLHL1Q9NR64 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KLHL1Q9NR64 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms