Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.01■□□□□ 0.79
HPS4Q9NQG7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HPS4Q9NQG7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HPS4Q9NQG7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.01■□□□□ 0.79
HPS4Q9NQG7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HPS4Q9NQG7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HPS4Q9NQG7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HPS4Q9NQG7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HPS4Q9NQG7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20■□□□□ 0.79
HPS4Q9NQG7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20■□□□□ 0.79
HPS4Q9NQG7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20■□□□□ 0.79
HPS4Q9NQG7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HPS4Q9NQG7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HPS4Q9NQG7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20■□□□□ 0.79
HPS4Q9NQG7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
HPS4Q9NQG7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20■□□□□ 0.79
HPS4Q9NQG7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
HPS4Q9NQG7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20■□□□□ 0.79
HPS4Q9NQG7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
HPS4Q9NQG7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20■□□□□ 0.79
HPS4Q9NQG7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20■□□□□ 0.79
HPS4Q9NQG7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20■□□□□ 0.79
HPS4Q9NQG7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HPS4Q9NQG7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20■□□□□ 0.79
HPS4Q9NQG7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20■□□□□ 0.79
HPS4Q9NQG7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20■□□□□ 0.79
HPS4Q9NQG7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HPS4Q9NQG7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20■□□□□ 0.79
HPS4Q9NQG7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20■□□□□ 0.79
HPS4Q9NQG7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HPS4Q9NQG7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HPS4Q9NQG7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
HPS4Q9NQG7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HPS4Q9NQG7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HPS4Q9NQG7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HPS4Q9NQG7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.99■□□□□ 0.79
HPS4Q9NQG7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
HPS4Q9NQG7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.99■□□□□ 0.79
HPS4Q9NQG7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HPS4Q9NQG7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
HPS4Q9NQG7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.99■□□□□ 0.79
HPS4Q9NQG7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HPS4Q9NQG7 HMGA1P5-201ENST00000412453 271 ntBASIC19.99■□□□□ 0.79
HPS4Q9NQG7 BX664615.1-201ENST00000443558 458 ntBASIC19.99■□□□□ 0.79
HPS4Q9NQG7 AC087388.1-201ENST00000571370 1112 ntBASIC19.99■□□□□ 0.79
HPS4Q9NQG7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
HPS4Q9NQG7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.99■□□□□ 0.79
HPS4Q9NQG7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HPS4Q9NQG7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HPS4Q9NQG7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HPS4Q9NQG7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HPS4Q9NQG7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.99■□□□□ 0.79
HPS4Q9NQG7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HPS4Q9NQG7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HPS4Q9NQG7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS4Q9NQG7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.98■□□□□ 0.79
HPS4Q9NQG7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
HPS4Q9NQG7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS4Q9NQG7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS4Q9NQG7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS4Q9NQG7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
HPS4Q9NQG7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS4Q9NQG7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.98■□□□□ 0.79
HPS4Q9NQG7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.98■□□□□ 0.79
HPS4Q9NQG7 AK4P3-201ENST00000418260 669 ntBASIC19.98■□□□□ 0.79
HPS4Q9NQG7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HPS4Q9NQG7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.98■□□□□ 0.79
HPS4Q9NQG7 AL138966.2-201ENST00000621997 464 ntBASIC19.98■□□□□ 0.79
HPS4Q9NQG7 AC116562.4-202ENST00000641738 218 ntBASIC19.98■□□□□ 0.79
HPS4Q9NQG7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.98■□□□□ 0.79
HPS4Q9NQG7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS4Q9NQG7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HPS4Q9NQG7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS4Q9NQG7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS4Q9NQG7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS4Q9NQG7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS4Q9NQG7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HPS4Q9NQG7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HPS4Q9NQG7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS4Q9NQG7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HPS4Q9NQG7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS4Q9NQG7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS4Q9NQG7 AP001271.2-201ENST00000624018 1556 ntBASIC19.97■□□□□ 0.79
HPS4Q9NQG7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS4Q9NQG7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HPS4Q9NQG7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS4Q9NQG7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS4Q9NQG7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
HPS4Q9NQG7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
HPS4Q9NQG7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.97■□□□□ 0.79
HPS4Q9NQG7 AC117947.1-201ENST00000427448 529 ntBASIC19.97■□□□□ 0.79
HPS4Q9NQG7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.97■□□□□ 0.79
HPS4Q9NQG7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.97■□□□□ 0.79
HPS4Q9NQG7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS4Q9NQG7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.97■□□□□ 0.79
HPS4Q9NQG7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.97■□□□□ 0.79
HPS4Q9NQG7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS4Q9NQG7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS4Q9NQG7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS4Q9NQG7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms