Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
ZFYVE28Q9HCC9 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC22.14■■□□□ 1.13
ZFYVE28Q9HCC9 MIR3180-1-201ENST00000580374 94 ntBASIC22.14■■□□□ 1.13
ZFYVE28Q9HCC9 MIR3180-3-201ENST00000584616 94 ntBASIC22.14■■□□□ 1.13
ZFYVE28Q9HCC9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC22.14■■□□□ 1.13
ZFYVE28Q9HCC9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
ZFYVE28Q9HCC9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.14■■□□□ 1.13
ZFYVE28Q9HCC9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.14■■□□□ 1.13
ZFYVE28Q9HCC9 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
ZFYVE28Q9HCC9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.14■■□□□ 1.13
ZFYVE28Q9HCC9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
ZFYVE28Q9HCC9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
ZFYVE28Q9HCC9 AP001271.2-201ENST00000624018 1556 ntBASIC22.13■■□□□ 1.13
ZFYVE28Q9HCC9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.13■■□□□ 1.13
ZFYVE28Q9HCC9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC22.13■■□□□ 1.13
ZFYVE28Q9HCC9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC22.13■■□□□ 1.13
ZFYVE28Q9HCC9 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC22.13■■□□□ 1.13
ZFYVE28Q9HCC9 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ZFYVE28Q9HCC9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.13■■□□□ 1.13
ZFYVE28Q9HCC9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ZFYVE28Q9HCC9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ZFYVE28Q9HCC9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZFYVE28Q9HCC9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZFYVE28Q9HCC9 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZFYVE28Q9HCC9 SMG8-203ENST00000578922 2178 ntBASIC22.12■■□□□ 1.13
ZFYVE28Q9HCC9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZFYVE28Q9HCC9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZFYVE28Q9HCC9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
ZFYVE28Q9HCC9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ZFYVE28Q9HCC9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZFYVE28Q9HCC9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
ZFYVE28Q9HCC9 NUS1P1-201ENST00000446295 882 ntBASIC22.12■■□□□ 1.13
ZFYVE28Q9HCC9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZFYVE28Q9HCC9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC22.12■■□□□ 1.13
ZFYVE28Q9HCC9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZFYVE28Q9HCC9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZFYVE28Q9HCC9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 BX119927.1-201ENST00000636596 1552 ntBASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.11■■□□□ 1.13
ZFYVE28Q9HCC9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZFYVE28Q9HCC9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ZFYVE28Q9HCC9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC22.1■■□□□ 1.13
ZFYVE28Q9HCC9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
ZFYVE28Q9HCC9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZFYVE28Q9HCC9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ZFYVE28Q9HCC9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
ZFYVE28Q9HCC9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC22.1■■□□□ 1.13
ZFYVE28Q9HCC9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC22.1■■□□□ 1.13
ZFYVE28Q9HCC9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC22.1■■□□□ 1.13
ZFYVE28Q9HCC9 MIR4674-201ENST00000582457 87 ntBASIC22.1■■□□□ 1.13
ZFYVE28Q9HCC9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC22.1■■□□□ 1.13
ZFYVE28Q9HCC9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
ZFYVE28Q9HCC9 AC006538.3-201ENST00000612495 578 ntBASIC22.1■■□□□ 1.13
ZFYVE28Q9HCC9 AC023511.2-201ENST00000618803 211 ntBASIC22.1■■□□□ 1.13
ZFYVE28Q9HCC9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC22.1■■□□□ 1.13
ZFYVE28Q9HCC9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZFYVE28Q9HCC9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ZFYVE28Q9HCC9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ZFYVE28Q9HCC9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ZFYVE28Q9HCC9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ZFYVE28Q9HCC9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ZFYVE28Q9HCC9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ZFYVE28Q9HCC9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ZFYVE28Q9HCC9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ZFYVE28Q9HCC9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ZFYVE28Q9HCC9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ZFYVE28Q9HCC9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ZFYVE28Q9HCC9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC22.09■■□□□ 1.13
ZFYVE28Q9HCC9 AP002383.4-201ENST00000442518 975 ntBASIC22.09■■□□□ 1.13
ZFYVE28Q9HCC9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
ZFYVE28Q9HCC9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC22.09■■□□□ 1.13
ZFYVE28Q9HCC9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC22.09■■□□□ 1.13
ZFYVE28Q9HCC9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ZFYVE28Q9HCC9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC22.09■■□□□ 1.13
ZFYVE28Q9HCC9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
ZFYVE28Q9HCC9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC22.09■■□□□ 1.13
ZFYVE28Q9HCC9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.09■■□□□ 1.13
ZFYVE28Q9HCC9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ZFYVE28Q9HCC9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms