Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
TUBB1Q9H4B7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TUBB1Q9H4B7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.64■□□□□ 0.58
TUBB1Q9H4B7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TUBB1Q9H4B7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.64■□□□□ 0.58
TUBB1Q9H4B7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB1Q9H4B7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB1Q9H4B7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB1Q9H4B7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB1Q9H4B7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.64■□□□□ 0.57
TUBB1Q9H4B7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB1Q9H4B7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.64■□□□□ 0.57
TUBB1Q9H4B7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.64■□□□□ 0.57
TUBB1Q9H4B7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.64■□□□□ 0.57
TUBB1Q9H4B7 HLA-B-256ENST00000639848 1089 ntBASIC18.64■□□□□ 0.57
TUBB1Q9H4B7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB1Q9H4B7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB1Q9H4B7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB1Q9H4B7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
TUBB1Q9H4B7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB1Q9H4B7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TUBB1Q9H4B7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 IRX1P1-201ENST00000438849 1838 ntBASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 AC098934.4-201ENST00000564127 592 ntBASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 AL121906.2-201ENST00000621597 723 ntBASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 AC009113.1-201ENST00000570267 2443 ntBASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 AL031598.1-201ENST00000561511 1773 ntBASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB1Q9H4B7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 PNMA6B-201ENST00000538162 1200 ntBASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB1Q9H4B7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 SLC29A4P1-201ENST00000398760 971 ntBASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 AC097658.1-201ENST00000475555 843 ntBASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms