Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDT1Q9H211 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDT1Q9H211 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDT1Q9H211 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDT1Q9H211 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.99■□□□□ 0.95
CDT1Q9H211 CRYGFP-201ENST00000418459 633 ntBASIC20.99■□□□□ 0.95
CDT1Q9H211 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.99■□□□□ 0.95
CDT1Q9H211 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.99■□□□□ 0.95
CDT1Q9H211 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDT1Q9H211 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CDT1Q9H211 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CDT1Q9H211 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDT1Q9H211 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CDT1Q9H211 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.99■□□□□ 0.95
CDT1Q9H211 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CDT1Q9H211 SDHAP1-207ENST00000440850 2000 ntBASIC20.99■□□□□ 0.95
CDT1Q9H211 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDT1Q9H211 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDT1Q9H211 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDT1Q9H211 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
CDT1Q9H211 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDT1Q9H211 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.98■□□□□ 0.95
CDT1Q9H211 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDT1Q9H211 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CDT1Q9H211 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDT1Q9H211 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CDT1Q9H211 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.98■□□□□ 0.95
CDT1Q9H211 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.98■□□□□ 0.95
CDT1Q9H211 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.98■□□□□ 0.95
CDT1Q9H211 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.98■□□□□ 0.95
CDT1Q9H211 LINC01023-201ENST00000606054 436 ntBASIC20.98■□□□□ 0.95
CDT1Q9H211 AC010947.1-201ENST00000623454 693 ntBASIC20.98■□□□□ 0.95
CDT1Q9H211 AC097493.4-201ENST00000641197 219 ntBASIC20.98■□□□□ 0.95
CDT1Q9H211 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDT1Q9H211 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.98■□□□□ 0.95
CDT1Q9H211 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDT1Q9H211 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDT1Q9H211 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDT1Q9H211 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDT1Q9H211 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDT1Q9H211 AC096733.2-201ENST00000609937 1394 ntBASIC20.97■□□□□ 0.95
CDT1Q9H211 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.97■□□□□ 0.95
CDT1Q9H211 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CDT1Q9H211 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CDT1Q9H211 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDT1Q9H211 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDT1Q9H211 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.97■□□□□ 0.95
CDT1Q9H211 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
CDT1Q9H211 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.97■□□□□ 0.95
CDT1Q9H211 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDT1Q9H211 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.97■□□□□ 0.95
CDT1Q9H211 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CDT1Q9H211 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDT1Q9H211 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
CDT1Q9H211 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.97■□□□□ 0.95
CDT1Q9H211 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CDT1Q9H211 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.97■□□□□ 0.95
CDT1Q9H211 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDT1Q9H211 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CDT1Q9H211 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDT1Q9H211 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDT1Q9H211 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDT1Q9H211 AL158211.5-201ENST00000623583 2518 ntBASIC20.97■□□□□ 0.95
CDT1Q9H211 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.97■□□□□ 0.95
CDT1Q9H211 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDT1Q9H211 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDT1Q9H211 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDT1Q9H211 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDT1Q9H211 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.96■□□□□ 0.95
CDT1Q9H211 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDT1Q9H211 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDT1Q9H211 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDT1Q9H211 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.96■□□□□ 0.95
CDT1Q9H211 MFAP1P1-201ENST00000442257 1255 ntBASIC20.96■□□□□ 0.95
CDT1Q9H211 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.96■□□□□ 0.95
CDT1Q9H211 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.96■□□□□ 0.95
CDT1Q9H211 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.96■□□□□ 0.95
CDT1Q9H211 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.96■□□□□ 0.95
CDT1Q9H211 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CDT1Q9H211 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDT1Q9H211 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDT1Q9H211 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDT1Q9H211 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDT1Q9H211 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDT1Q9H211 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDT1Q9H211 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.95■□□□□ 0.94
CDT1Q9H211 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.95■□□□□ 0.94
CDT1Q9H211 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDT1Q9H211 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDT1Q9H211 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDT1Q9H211 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.95■□□□□ 0.94
CDT1Q9H211 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDT1Q9H211 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDT1Q9H211 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
CDT1Q9H211 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.95■□□□□ 0.94
CDT1Q9H211 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.95■□□□□ 0.94
CDT1Q9H211 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDT1Q9H211 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.95■□□□□ 0.94
CDT1Q9H211 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CDT1Q9H211 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms