Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 KRT8P8-201ENST00000434750 1448 ntBASIC17.78■□□□□ 0.44
TRIM2Q9C040 AC087289.5-201ENST00000586076 3175 ntBASIC17.78■□□□□ 0.44
TRIM2Q9C040 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM2Q9C040 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM2Q9C040 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM2Q9C040 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM2Q9C040 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRIM2Q9C040 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM2Q9C040 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM2Q9C040 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM2Q9C040 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM2Q9C040 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM2Q9C040 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM2Q9C040 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM2Q9C040 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM2Q9C040 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM2Q9C040 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM2Q9C040 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM2Q9C040 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM2Q9C040 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM2Q9C040 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM2Q9C040 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM2Q9C040 ESRRAP1-201ENST00000400596 1257 ntBASIC17.77■□□□□ 0.44
TRIM2Q9C040 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.77■□□□□ 0.44
TRIM2Q9C040 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM2Q9C040 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
TRIM2Q9C040 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TRIM2Q9C040 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM2Q9C040 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM2Q9C040 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM2Q9C040 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
TRIM2Q9C040 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
TRIM2Q9C040 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
TRIM2Q9C040 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
TRIM2Q9C040 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
TRIM2Q9C040 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM2Q9C040 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
TRIM2Q9C040 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM2Q9C040 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM2Q9C040 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM2Q9C040 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM2Q9C040 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM2Q9C040 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRIM2Q9C040 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM2Q9C040 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM2Q9C040 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM2Q9C040 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM2Q9C040 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM2Q9C040 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRIM2Q9C040 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM2Q9C040 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TRIM2Q9C040 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRIM2Q9C040 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM2Q9C040 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM2Q9C040 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRIM2Q9C040 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM2Q9C040 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM2Q9C040 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM2Q9C040 AP000974.1-201ENST00000623909 2387 ntBASIC17.76■□□□□ 0.43
TRIM2Q9C040 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRIM2Q9C040 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM2Q9C040 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM2Q9C040 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM2Q9C040 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM2Q9C040 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM2Q9C040 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM2Q9C040 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM2Q9C040 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM2Q9C040 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRIM2Q9C040 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM2Q9C040 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM2Q9C040 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM2Q9C040 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM2Q9C040 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM2Q9C040 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM2Q9C040 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM2Q9C040 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM2Q9C040 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM2Q9C040 PRORSD1P-201ENST00000295112 541 ntBASIC17.75■□□□□ 0.43
TRIM2Q9C040 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM2Q9C040 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM2Q9C040 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM2Q9C040 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
TRIM2Q9C040 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM2Q9C040 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.75■□□□□ 0.43
TRIM2Q9C040 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.75■□□□□ 0.43
TRIM2Q9C040 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM2Q9C040 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM2Q9C040 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRIM2Q9C040 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM2Q9C040 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
TRIM2Q9C040 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM2Q9C040 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM2Q9C040 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM2Q9C040 AC090340.1-201ENST00000620778 4980 ntBASIC17.75■□□□□ 0.43
TRIM2Q9C040 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM2Q9C040 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM2Q9C040 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM2Q9C040 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM2Q9C040 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms