Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
KRTAP3-3Q9BYR6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
KRTAP3-3Q9BYR6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
KRTAP3-3Q9BYR6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
KRTAP3-3Q9BYR6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AL078590.2-201ENST00000417483 1360 ntTSL 3 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 Y_RNA.408-201ENST00000383987 102 ntBASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 SYCP3-203ENST00000392927 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 GSTA8P-201ENST00000404253 637 ntBASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 TANK-206ENST00000406287 875 ntTSL 5 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AC010460.1-201ENST00000507087 466 ntBASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AC114940.1-201ENST00000512162 1265 ntBASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 PVT1-214ENST00000522875 922 ntTSL 5 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 ZKSCAN7P1-201ENST00000543668 673 ntBASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 ETFRF1-203ENST00000554266 429 ntTSL 3 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AC002306.1-201ENST00000559614 937 ntTSL 3 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AC105021.1-202ENST00000570572 669 ntBASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AP001160.4-201ENST00000596971 382 ntBASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AC010530.1-201ENST00000602844 569 ntTSL 4 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AC023302.1-201ENST00000607458 492 ntBASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AC103591.3-201ENST00000608684 209 ntBASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AC005156.1-201ENST00000613371 573 ntBASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AC019080.5-201ENST00000624891 757 ntBASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 AC097372.4-201ENST00000625025 466 ntBASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 EXOC1L-202ENST00000636125 863 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 NF1P7-201ENST00000612076 1530 ntBASIC11.95□□□□□ -0.5
KRTAP3-3Q9BYR6 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 TDRD12-201ENST00000421545 1317 ntTSL 5 BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 HCFC2P1-201ENST00000392864 1592 ntBASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 BX005132.1-201ENST00000641403 1580 ntBASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 NOVA1-201ENST00000344429 896 ntTSL 2 BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 AC013448.1-201ENST00000422118 808 ntTSL 3 BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 MTCO1P51-201ENST00000427672 1060 ntBASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 AC074386.1-206ENST00000487102 761 ntBASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 SLC10A7-205ENST00000507030 1134 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 ADAMTS12-206ENST00000515401 1003 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 AC087373.1-201ENST00000524920 491 ntBASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 AC011330.2-201ENST00000621680 635 ntBASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 AC007671.2-201ENST00000637344 619 ntBASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 AC022211.4-201ENST00000625094 2161 ntBASIC11.94□□□□□ -0.5
KRTAP3-3Q9BYR6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 PSMC1-202ENST00000543772 1389 ntTSL 2 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 RNU6-116P-201ENST00000384042 109 ntBASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 RNU6-1000P-201ENST00000391066 106 ntBASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 AL445238.1-204ENST00000400311 463 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms