Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC23.56■■□□□ 1.36
RTFDC1Q9BY42 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC23.56■■□□□ 1.36
RTFDC1Q9BY42 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC23.56■■□□□ 1.36
RTFDC1Q9BY42 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RTFDC1Q9BY42 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC23.56■■□□□ 1.36
RTFDC1Q9BY42 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
RTFDC1Q9BY42 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RTFDC1Q9BY42 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RTFDC1Q9BY42 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.56■■□□□ 1.36
RTFDC1Q9BY42 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RTFDC1Q9BY42 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RTFDC1Q9BY42 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RTFDC1Q9BY42 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RTFDC1Q9BY42 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RTFDC1Q9BY42 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC23.55■■□□□ 1.36
RTFDC1Q9BY42 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RTFDC1Q9BY42 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RTFDC1Q9BY42 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
RTFDC1Q9BY42 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RTFDC1Q9BY42 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC23.55■■□□□ 1.36
RTFDC1Q9BY42 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC23.55■■□□□ 1.36
RTFDC1Q9BY42 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RTFDC1Q9BY42 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RTFDC1Q9BY42 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.55■■□□□ 1.36
RTFDC1Q9BY42 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.55■■□□□ 1.36
RTFDC1Q9BY42 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC23.54■■□□□ 1.36
RTFDC1Q9BY42 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC23.54■■□□□ 1.36
RTFDC1Q9BY42 SPDYE13P-201ENST00000445314 798 ntBASIC23.54■■□□□ 1.36
RTFDC1Q9BY42 CNP-204ENST00000472031 1019 ntTSL 2 BASIC23.54■■□□□ 1.36
RTFDC1Q9BY42 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.54■■□□□ 1.36
RTFDC1Q9BY42 PP7080-204ENST00000510714 601 ntTSL 3 BASIC23.54■■□□□ 1.36
RTFDC1Q9BY42 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RTFDC1Q9BY42 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC23.54■■□□□ 1.36
RTFDC1Q9BY42 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC23.54■■□□□ 1.36
RTFDC1Q9BY42 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RTFDC1Q9BY42 CLN6-214ENST00000636314 442 ntTSL 3 BASIC23.54■■□□□ 1.36
RTFDC1Q9BY42 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.54■■□□□ 1.36
RTFDC1Q9BY42 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RTFDC1Q9BY42 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RTFDC1Q9BY42 AP005212.1-201ENST00000581547 1997 ntBASIC23.54■■□□□ 1.36
RTFDC1Q9BY42 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RTFDC1Q9BY42 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
RTFDC1Q9BY42 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RTFDC1Q9BY42 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
RTFDC1Q9BY42 LINC01311-201ENST00000565162 1445 ntBASIC23.53■■□□□ 1.36
RTFDC1Q9BY42 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RTFDC1Q9BY42 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RTFDC1Q9BY42 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC23.53■■□□□ 1.36
RTFDC1Q9BY42 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RTFDC1Q9BY42 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RTFDC1Q9BY42 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
RTFDC1Q9BY42 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
RTFDC1Q9BY42 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 SPDYE15P-201ENST00000424157 909 ntBASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 VPS72-207ENST00000640458 689 ntTSL 5 BASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 AL512408.1-201ENST00000569378 2000 ntBASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
RTFDC1Q9BY42 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTFDC1Q9BY42 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
RTFDC1Q9BY42 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTFDC1Q9BY42 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTFDC1Q9BY42 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC23.51■■□□□ 1.35
RTFDC1Q9BY42 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC23.51■■□□□ 1.35
RTFDC1Q9BY42 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC23.51■■□□□ 1.35
RTFDC1Q9BY42 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC23.51■■□□□ 1.35
RTFDC1Q9BY42 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC23.51■■□□□ 1.35
RTFDC1Q9BY42 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC23.51■■□□□ 1.35
RTFDC1Q9BY42 MIR4674-201ENST00000582457 87 ntBASIC23.51■■□□□ 1.35
RTFDC1Q9BY42 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC23.51■■□□□ 1.35
RTFDC1Q9BY42 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTFDC1Q9BY42 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RTFDC1Q9BY42 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTFDC1Q9BY42 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
RTFDC1Q9BY42 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC23.51■■□□□ 1.35
RTFDC1Q9BY42 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RTFDC1Q9BY42 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.51■■□□□ 1.35
RTFDC1Q9BY42 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTFDC1Q9BY42 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.5■■□□□ 1.35
RTFDC1Q9BY42 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC23.5■■□□□ 1.35
RTFDC1Q9BY42 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
RTFDC1Q9BY42 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTFDC1Q9BY42 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms