Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC23.52■■□□□ 1.35
RPAP1Q9BWH6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC23.52■■□□□ 1.35
RPAP1Q9BWH6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.35
RPAP1Q9BWH6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RPAP1Q9BWH6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC23.51■■□□□ 1.35
RPAP1Q9BWH6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.51■■□□□ 1.35
RPAP1Q9BWH6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RPAP1Q9BWH6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RPAP1Q9BWH6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
RPAP1Q9BWH6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RPAP1Q9BWH6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
RPAP1Q9BWH6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
RPAP1Q9BWH6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
RPAP1Q9BWH6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RPAP1Q9BWH6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RPAP1Q9BWH6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
RPAP1Q9BWH6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RPAP1Q9BWH6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RPAP1Q9BWH6 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.51■■□□□ 1.35
RPAP1Q9BWH6 SLC25A3P1-201ENST00000443844 931 ntBASIC23.51■■□□□ 1.35
RPAP1Q9BWH6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.51■■□□□ 1.35
RPAP1Q9BWH6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC23.51■■□□□ 1.35
RPAP1Q9BWH6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RPAP1Q9BWH6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
RPAP1Q9BWH6 AL031985.4-201ENST00000642138 673 ntBASIC23.51■■□□□ 1.35
RPAP1Q9BWH6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RPAP1Q9BWH6 AC073508.3-201ENST00000619697 1419 ntBASIC23.5■■□□□ 1.35
RPAP1Q9BWH6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
RPAP1Q9BWH6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RPAP1Q9BWH6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
RPAP1Q9BWH6 KRT18P22-201ENST00000402024 1347 ntBASIC23.5■■□□□ 1.35
RPAP1Q9BWH6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RPAP1Q9BWH6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
RPAP1Q9BWH6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RPAP1Q9BWH6 KRT18P16-201ENST00000510337 1294 ntBASIC23.5■■□□□ 1.35
RPAP1Q9BWH6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC23.5■■□□□ 1.35
RPAP1Q9BWH6 AL049597.2-201ENST00000565575 961 ntBASIC23.5■■□□□ 1.35
RPAP1Q9BWH6 AP005242.2-201ENST00000580065 1175 ntBASIC23.5■■□□□ 1.35
RPAP1Q9BWH6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC23.5■■□□□ 1.35
RPAP1Q9BWH6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC23.5■■□□□ 1.35
RPAP1Q9BWH6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
RPAP1Q9BWH6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.5■■□□□ 1.35
RPAP1Q9BWH6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
RPAP1Q9BWH6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RPAP1Q9BWH6 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.49■■□□□ 1.35
RPAP1Q9BWH6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RPAP1Q9BWH6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.49■■□□□ 1.35
RPAP1Q9BWH6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
RPAP1Q9BWH6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RPAP1Q9BWH6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RPAP1Q9BWH6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RPAP1Q9BWH6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
RPAP1Q9BWH6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.49■■□□□ 1.35
RPAP1Q9BWH6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC23.49■■□□□ 1.35
RPAP1Q9BWH6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.49■■□□□ 1.35
RPAP1Q9BWH6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.49■■□□□ 1.35
RPAP1Q9BWH6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC23.49■■□□□ 1.35
RPAP1Q9BWH6 AL590326.2-201ENST00000625139 305 ntBASIC23.49■■□□□ 1.35
RPAP1Q9BWH6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
RPAP1Q9BWH6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC23.48■■□□□ 1.35
RPAP1Q9BWH6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RPAP1Q9BWH6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.48■■□□□ 1.35
RPAP1Q9BWH6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RPAP1Q9BWH6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RPAP1Q9BWH6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RPAP1Q9BWH6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RPAP1Q9BWH6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
RPAP1Q9BWH6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RPAP1Q9BWH6 KRT18P57-201ENST00000443599 1254 ntBASIC23.48■■□□□ 1.35
RPAP1Q9BWH6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RPAP1Q9BWH6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
RPAP1Q9BWH6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC23.48■■□□□ 1.35
RPAP1Q9BWH6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.48■■□□□ 1.35
RPAP1Q9BWH6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
RPAP1Q9BWH6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC23.48■■□□□ 1.35
RPAP1Q9BWH6 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.48■■□□□ 1.35
RPAP1Q9BWH6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.48■■□□□ 1.35
RPAP1Q9BWH6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RPAP1Q9BWH6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.48■■□□□ 1.35
RPAP1Q9BWH6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
RPAP1Q9BWH6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
RPAP1Q9BWH6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
RPAP1Q9BWH6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
RPAP1Q9BWH6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RPAP1Q9BWH6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.47■■□□□ 1.35
RPAP1Q9BWH6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
RPAP1Q9BWH6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
RPAP1Q9BWH6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC23.47■■□□□ 1.35
RPAP1Q9BWH6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC23.47■■□□□ 1.35
RPAP1Q9BWH6 FSCN1P1-201ENST00000568912 1481 ntBASIC23.47■■□□□ 1.35
RPAP1Q9BWH6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.47■■□□□ 1.35
RPAP1Q9BWH6 GOLGA6L3-201ENST00000507199 1679 ntBASIC23.47■■□□□ 1.35
RPAP1Q9BWH6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.47■■□□□ 1.35
RPAP1Q9BWH6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
RPAP1Q9BWH6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23.46■■□□□ 1.35
RPAP1Q9BWH6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.46■■□□□ 1.35
RPAP1Q9BWH6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
RPAP1Q9BWH6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RPAP1Q9BWH6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms