Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YIPF4Q9BSR8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
YIPF4Q9BSR8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YIPF4Q9BSR8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YIPF4Q9BSR8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YIPF4Q9BSR8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YIPF4Q9BSR8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.18■□□□□ 0.5
YIPF4Q9BSR8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
YIPF4Q9BSR8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
YIPF4Q9BSR8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YIPF4Q9BSR8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.18■□□□□ 0.5
YIPF4Q9BSR8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.18■□□□□ 0.5
YIPF4Q9BSR8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.18■□□□□ 0.5
YIPF4Q9BSR8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
YIPF4Q9BSR8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YIPF4Q9BSR8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.18■□□□□ 0.5
YIPF4Q9BSR8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.18■□□□□ 0.5
YIPF4Q9BSR8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YIPF4Q9BSR8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
YIPF4Q9BSR8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
YIPF4Q9BSR8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
YIPF4Q9BSR8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 POM121L13P-201ENST00000422362 380 ntBASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 AC008403.3-201ENST00000598924 454 ntBASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 AL121829.2-201ENST00000620908 328 ntBASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
YIPF4Q9BSR8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 AC018445.3-201ENST00000624177 1945 ntBASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 YBX1P10-201ENST00000444752 975 ntBASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
YIPF4Q9BSR8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms