Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VGLL1Q99990 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
VGLL1Q99990 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
VGLL1Q99990 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
VGLL1Q99990 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.65□□□□□ -0.06
VGLL1Q99990 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VGLL1Q99990 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.65□□□□□ -0.06
VGLL1Q99990 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.65□□□□□ -0.06
VGLL1Q99990 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VGLL1Q99990 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VGLL1Q99990 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.07
VGLL1Q99990 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VGLL1Q99990 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
VGLL1Q99990 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.64□□□□□ -0.07
VGLL1Q99990 AC116351.2-201ENST00000606540 1585 ntBASIC14.64□□□□□ -0.07
VGLL1Q99990 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
VGLL1Q99990 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VGLL1Q99990 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.64□□□□□ -0.07
VGLL1Q99990 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VGLL1Q99990 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
VGLL1Q99990 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VGLL1Q99990 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VGLL1Q99990 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
VGLL1Q99990 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VGLL1Q99990 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.64□□□□□ -0.07
VGLL1Q99990 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VGLL1Q99990 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
VGLL1Q99990 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.64□□□□□ -0.07
VGLL1Q99990 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
VGLL1Q99990 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VGLL1Q99990 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.64□□□□□ -0.07
VGLL1Q99990 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.64□□□□□ -0.07
VGLL1Q99990 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VGLL1Q99990 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VGLL1Q99990 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
VGLL1Q99990 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.64□□□□□ -0.07
VGLL1Q99990 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VGLL1Q99990 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.64□□□□□ -0.07
VGLL1Q99990 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.64□□□□□ -0.07
VGLL1Q99990 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
VGLL1Q99990 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.64□□□□□ -0.07
VGLL1Q99990 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VGLL1Q99990 AL049812.1-201ENST00000432563 2267 ntBASIC14.64□□□□□ -0.07
VGLL1Q99990 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VGLL1Q99990 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
VGLL1Q99990 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
VGLL1Q99990 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VGLL1Q99990 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
VGLL1Q99990 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
VGLL1Q99990 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.64□□□□□ -0.07
VGLL1Q99990 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.64□□□□□ -0.07
VGLL1Q99990 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VGLL1Q99990 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VGLL1Q99990 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VGLL1Q99990 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
VGLL1Q99990 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
VGLL1Q99990 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VGLL1Q99990 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VGLL1Q99990 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
VGLL1Q99990 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VGLL1Q99990 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VGLL1Q99990 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VGLL1Q99990 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VGLL1Q99990 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VGLL1Q99990 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.63□□□□□ -0.07
VGLL1Q99990 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.63□□□□□ -0.07
VGLL1Q99990 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
VGLL1Q99990 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VGLL1Q99990 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VGLL1Q99990 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VGLL1Q99990 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VGLL1Q99990 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VGLL1Q99990 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
VGLL1Q99990 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.63□□□□□ -0.07
VGLL1Q99990 LSM12P1-201ENST00000411836 588 ntBASIC14.63□□□□□ -0.07
VGLL1Q99990 AL512625.2-201ENST00000417533 625 ntBASIC14.63□□□□□ -0.07
VGLL1Q99990 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.63□□□□□ -0.07
VGLL1Q99990 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VGLL1Q99990 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
VGLL1Q99990 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.63□□□□□ -0.07
VGLL1Q99990 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VGLL1Q99990 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VGLL1Q99990 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
VGLL1Q99990 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VGLL1Q99990 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VGLL1Q99990 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.63□□□□□ -0.07
VGLL1Q99990 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.63□□□□□ -0.07
VGLL1Q99990 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
VGLL1Q99990 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VGLL1Q99990 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
VGLL1Q99990 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VGLL1Q99990 TEX21P-204ENST00000641479 1693 ntBASIC14.62□□□□□ -0.07
VGLL1Q99990 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VGLL1Q99990 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VGLL1Q99990 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VGLL1Q99990 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VGLL1Q99990 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VGLL1Q99990 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VGLL1Q99990 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VGLL1Q99990 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms