Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
NPAS2Q99743 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS2Q99743 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.9■□□□□ 0.62
NPAS2Q99743 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.9■□□□□ 0.62
NPAS2Q99743 AC008687.6-201ENST00000596318 630 ntBASIC18.9■□□□□ 0.62
NPAS2Q99743 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.9■□□□□ 0.62
NPAS2Q99743 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS2Q99743 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS2Q99743 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS2Q99743 KRT16P6-202ENST00000425692 1426 ntBASIC18.9■□□□□ 0.62
NPAS2Q99743 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
NPAS2Q99743 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS2Q99743 AP001271.2-201ENST00000624018 1556 ntBASIC18.89■□□□□ 0.62
NPAS2Q99743 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NPAS2Q99743 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS2Q99743 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS2Q99743 PRORSD1P-201ENST00000295112 541 ntBASIC18.89■□□□□ 0.61
NPAS2Q99743 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS2Q99743 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS2Q99743 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS2Q99743 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.89■□□□□ 0.61
NPAS2Q99743 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.89■□□□□ 0.61
NPAS2Q99743 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.89■□□□□ 0.61
NPAS2Q99743 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS2Q99743 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS2Q99743 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS2Q99743 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.89■□□□□ 0.61
NPAS2Q99743 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS2Q99743 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS2Q99743 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
NPAS2Q99743 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.89■□□□□ 0.61
NPAS2Q99743 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS2Q99743 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS2Q99743 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS2Q99743 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS2Q99743 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS2Q99743 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS2Q99743 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS2Q99743 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
NPAS2Q99743 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NPAS2Q99743 CROCCP3-202ENST00000420820 1947 ntBASIC18.88■□□□□ 0.61
NPAS2Q99743 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS2Q99743 AC005082.1-201ENST00000413042 2259 ntBASIC18.88■□□□□ 0.61
NPAS2Q99743 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS2Q99743 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.88■□□□□ 0.61
NPAS2Q99743 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
NPAS2Q99743 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.88■□□□□ 0.61
NPAS2Q99743 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.88■□□□□ 0.61
NPAS2Q99743 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.88■□□□□ 0.61
NPAS2Q99743 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS2Q99743 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
NPAS2Q99743 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.88■□□□□ 0.61
NPAS2Q99743 AC060766.5-201ENST00000590539 871 ntBASIC18.88■□□□□ 0.61
NPAS2Q99743 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NPAS2Q99743 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS2Q99743 HLA-B-256ENST00000639848 1089 ntBASIC18.88■□□□□ 0.61
NPAS2Q99743 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS2Q99743 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS2Q99743 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NPAS2Q99743 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.88■□□□□ 0.61
NPAS2Q99743 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.88■□□□□ 0.61
NPAS2Q99743 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS2Q99743 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
NPAS2Q99743 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS2Q99743 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS2Q99743 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.88■□□□□ 0.61
NPAS2Q99743 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.88■□□□□ 0.61
NPAS2Q99743 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS2Q99743 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS2Q99743 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.87■□□□□ 0.61
NPAS2Q99743 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS2Q99743 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS2Q99743 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS2Q99743 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.87■□□□□ 0.61
NPAS2Q99743 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS2Q99743 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.87■□□□□ 0.61
NPAS2Q99743 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS2Q99743 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.87■□□□□ 0.61
NPAS2Q99743 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS2Q99743 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NPAS2Q99743 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS2Q99743 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NPAS2Q99743 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
NPAS2Q99743 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS2Q99743 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
NPAS2Q99743 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
NPAS2Q99743 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS2Q99743 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS2Q99743 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS2Q99743 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS2Q99743 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.86■□□□□ 0.61
NPAS2Q99743 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS2Q99743 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS2Q99743 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS2Q99743 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS2Q99743 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
NPAS2Q99743 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.86■□□□□ 0.61
NPAS2Q99743 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS2Q99743 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.86■□□□□ 0.61
NPAS2Q99743 KRT18P29-201ENST00000397031 1267 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms