Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A3Q99624 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A3Q99624 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A3Q99624 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A3Q99624 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A3Q99624 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SLC38A3Q99624 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.74■□□□□ 0.59
SLC38A3Q99624 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A3Q99624 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A3Q99624 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC38A3Q99624 TSPY14P-201ENST00000303979 915 ntBASIC18.74■□□□□ 0.59
SLC38A3Q99624 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC38A3Q99624 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
SLC38A3Q99624 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC38A3Q99624 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC38A3Q99624 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A3Q99624 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SLC38A3Q99624 SLC25A3P1-201ENST00000443844 931 ntBASIC18.74■□□□□ 0.59
SLC38A3Q99624 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A3Q99624 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A3Q99624 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A3Q99624 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A3Q99624 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A3Q99624 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC38A3Q99624 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A3Q99624 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A3Q99624 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.73■□□□□ 0.59
SLC38A3Q99624 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC38A3Q99624 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC38A3Q99624 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SLC38A3Q99624 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC38A3Q99624 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC38A3Q99624 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SLC38A3Q99624 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC38A3Q99624 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC38A3Q99624 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC38A3Q99624 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC38A3Q99624 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC38A3Q99624 LIN28AP1-201ENST00000429574 405 ntBASIC18.73■□□□□ 0.59
SLC38A3Q99624 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.73■□□□□ 0.59
SLC38A3Q99624 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC38A3Q99624 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC38A3Q99624 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC38A3Q99624 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC38A3Q99624 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SLC38A3Q99624 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
SLC38A3Q99624 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC38A3Q99624 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC38A3Q99624 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SLC38A3Q99624 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC38A3Q99624 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC38A3Q99624 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC38A3Q99624 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC38A3Q99624 AC096733.2-201ENST00000609937 1394 ntBASIC18.72■□□□□ 0.59
SLC38A3Q99624 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC38A3Q99624 AL157384.1-201ENST00000445995 2473 ntBASIC18.72■□□□□ 0.59
SLC38A3Q99624 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.72■□□□□ 0.59
SLC38A3Q99624 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC38A3Q99624 KRT18P57-201ENST00000443599 1254 ntBASIC18.72■□□□□ 0.59
SLC38A3Q99624 ATP5G1P1-201ENST00000448724 379 ntBASIC18.72■□□□□ 0.59
SLC38A3Q99624 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.72■□□□□ 0.59
SLC38A3Q99624 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC38A3Q99624 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC38A3Q99624 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC38A3Q99624 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC38A3Q99624 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC38A3Q99624 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SLC38A3Q99624 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A3Q99624 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A3Q99624 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A3Q99624 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC38A3Q99624 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
SLC38A3Q99624 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A3Q99624 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A3Q99624 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A3Q99624 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC38A3Q99624 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SLC38A3Q99624 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A3Q99624 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A3Q99624 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A3Q99624 ECEL1P2-202ENST00000465689 757 ntBASIC18.71■□□□□ 0.59
SLC38A3Q99624 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A3Q99624 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC38A3Q99624 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC38A3Q99624 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SLC38A3Q99624 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A3Q99624 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC38A3Q99624 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A3Q99624 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SLC38A3Q99624 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC38A3Q99624 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SLC38A3Q99624 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A3Q99624 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A3Q99624 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
SLC38A3Q99624 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A3Q99624 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A3Q99624 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC38A3Q99624 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC38A3Q99624 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SLC38A3Q99624 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms