Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDK5RAP1Q96SZ6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDK5RAP1Q96SZ6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDK5RAP1Q96SZ6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDK5RAP1Q96SZ6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.09■□□□□ 0.81
CDK5RAP1Q96SZ6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.09■□□□□ 0.81
CDK5RAP1Q96SZ6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDK5RAP1Q96SZ6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDK5RAP1Q96SZ6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.09■□□□□ 0.81
CDK5RAP1Q96SZ6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDK5RAP1Q96SZ6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.09■□□□□ 0.81
CDK5RAP1Q96SZ6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDK5RAP1Q96SZ6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDK5RAP1Q96SZ6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDK5RAP1Q96SZ6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDK5RAP1Q96SZ6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDK5RAP1Q96SZ6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDK5RAP1Q96SZ6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
CDK5RAP1Q96SZ6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.08■□□□□ 0.81
CDK5RAP1Q96SZ6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDK5RAP1Q96SZ6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.08■□□□□ 0.81
CDK5RAP1Q96SZ6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDK5RAP1Q96SZ6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.08■□□□□ 0.81
CDK5RAP1Q96SZ6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDK5RAP1Q96SZ6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.08■□□□□ 0.81
CDK5RAP1Q96SZ6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDK5RAP1Q96SZ6 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDK5RAP1Q96SZ6 CRYGFP-201ENST00000418459 633 ntBASIC20.08■□□□□ 0.81
CDK5RAP1Q96SZ6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.08■□□□□ 0.81
CDK5RAP1Q96SZ6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDK5RAP1Q96SZ6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDK5RAP1Q96SZ6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDK5RAP1Q96SZ6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.08■□□□□ 0.8
CDK5RAP1Q96SZ6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDK5RAP1Q96SZ6 AC104417.2-201ENST00000562989 1793 ntBASIC20.08■□□□□ 0.8
CDK5RAP1Q96SZ6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.08■□□□□ 0.8
CDK5RAP1Q96SZ6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDK5RAP1Q96SZ6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDK5RAP1Q96SZ6 LINC01465-201ENST00000408887 1940 ntBASIC20.08■□□□□ 0.8
CDK5RAP1Q96SZ6 KRT8P41-201ENST00000533985 1514 ntBASIC20.07■□□□□ 0.8
CDK5RAP1Q96SZ6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.07■□□□□ 0.8
CDK5RAP1Q96SZ6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CDK5RAP1Q96SZ6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDK5RAP1Q96SZ6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.07■□□□□ 0.8
CDK5RAP1Q96SZ6 ECEL1P3-201ENST00000427961 737 ntBASIC20.07■□□□□ 0.8
CDK5RAP1Q96SZ6 AL390955.1-201ENST00000428694 934 ntBASIC20.07■□□□□ 0.8
CDK5RAP1Q96SZ6 AC008040.2-201ENST00000461049 708 ntBASIC20.07■□□□□ 0.8
CDK5RAP1Q96SZ6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CDK5RAP1Q96SZ6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.07■□□□□ 0.8
CDK5RAP1Q96SZ6 AC145285.6-201ENST00000604632 637 ntBASIC20.07■□□□□ 0.8
CDK5RAP1Q96SZ6 AC012306.2-201ENST00000609350 630 ntBASIC20.07■□□□□ 0.8
CDK5RAP1Q96SZ6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
CDK5RAP1Q96SZ6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.07■□□□□ 0.8
CDK5RAP1Q96SZ6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CDK5RAP1Q96SZ6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDK5RAP1Q96SZ6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDK5RAP1Q96SZ6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.07■□□□□ 0.8
CDK5RAP1Q96SZ6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDK5RAP1Q96SZ6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDK5RAP1Q96SZ6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDK5RAP1Q96SZ6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 MFAP1P1-201ENST00000442257 1255 ntBASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 PRSS44-201ENST00000515154 1146 ntBASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP1Q96SZ6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms