Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 AC133561.4-201ENST00000566112 224 ntBASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 AL512353.2-201ENST00000448759 1962 ntBASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 TEX21P-204ENST00000641479 1693 ntBASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 KRT16P6-202ENST00000425692 1426 ntBASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 SERBP1P1-201ENST00000396021 1160 ntBASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB3IPQ96QF0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IPQ96QF0 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.83■□□□□ 0.61
RAB3IPQ96QF0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB3IPQ96QF0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RAB3IPQ96QF0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB3IPQ96QF0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB3IPQ96QF0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
RAB3IPQ96QF0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RAB3IPQ96QF0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB3IPQ96QF0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
RAB3IPQ96QF0 AC011298.3-201ENST00000615796 283 ntBASIC18.83■□□□□ 0.6
RAB3IPQ96QF0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.83■□□□□ 0.6
RAB3IPQ96QF0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3IPQ96QF0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.83■□□□□ 0.6
RAB3IPQ96QF0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3IPQ96QF0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
RAB3IPQ96QF0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3IPQ96QF0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.83■□□□□ 0.6
RAB3IPQ96QF0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms