Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
DUX3Q96PT4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
DUX3Q96PT4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.04■□□□□ -0
DUX3Q96PT4 GABARAPL3-202ENST00000624044 1851 ntBASIC15.04■□□□□ -0
DUX3Q96PT4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
DUX3Q96PT4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
DUX3Q96PT4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.04■□□□□ -0
DUX3Q96PT4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.04■□□□□ -0
DUX3Q96PT4 TMEM179-206ENST00000616017 1645 ntBASIC15.04■□□□□ -0
DUX3Q96PT4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
DUX3Q96PT4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.04■□□□□ -0
DUX3Q96PT4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
DUX3Q96PT4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.04■□□□□ -0
DUX3Q96PT4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
DUX3Q96PT4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.04■□□□□ -0
DUX3Q96PT4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.04■□□□□ -0
DUX3Q96PT4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.04■□□□□ -0
DUX3Q96PT4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.04■□□□□ -0
DUX3Q96PT4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
DUX3Q96PT4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC15.04■□□□□ -0
DUX3Q96PT4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
DUX3Q96PT4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
DUX3Q96PT4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
DUX3Q96PT4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
DUX3Q96PT4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
DUX3Q96PT4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
DUX3Q96PT4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
DUX3Q96PT4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC15.03■□□□□ -0
DUX3Q96PT4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.03■□□□□ -0
DUX3Q96PT4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
DUX3Q96PT4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
DUX3Q96PT4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
DUX3Q96PT4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
DUX3Q96PT4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
DUX3Q96PT4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
DUX3Q96PT4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.03■□□□□ -0
DUX3Q96PT4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
DUX3Q96PT4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.03■□□□□ -0
DUX3Q96PT4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.03■□□□□ -0
DUX3Q96PT4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.03■□□□□ -0
DUX3Q96PT4 MIR6786-201ENST00000616843 113 ntBASIC15.03■□□□□ -0
DUX3Q96PT4 AL031985.4-201ENST00000642138 673 ntBASIC15.03■□□□□ -0
DUX3Q96PT4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.03■□□□□ -0
DUX3Q96PT4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.03■□□□□ -0
DUX3Q96PT4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
DUX3Q96PT4 LINC01465-201ENST00000408887 1940 ntBASIC15.03■□□□□ -0
DUX3Q96PT4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.03■□□□□ -0
DUX3Q96PT4 AC099778.1-201ENST00000568593 1911 ntBASIC15.03■□□□□ -0
DUX3Q96PT4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
DUX3Q96PT4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC15.03■□□□□ -0
DUX3Q96PT4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC15.03■□□□□ -0
DUX3Q96PT4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
DUX3Q96PT4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.02■□□□□ -0
DUX3Q96PT4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
DUX3Q96PT4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
DUX3Q96PT4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
DUX3Q96PT4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
DUX3Q96PT4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.02■□□□□ -0
DUX3Q96PT4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
DUX3Q96PT4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
DUX3Q96PT4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
DUX3Q96PT4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.02■□□□□ -0
DUX3Q96PT4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.02■□□□□ -0
DUX3Q96PT4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
DUX3Q96PT4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.02■□□□□ -0
DUX3Q96PT4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.02■□□□□ -0
DUX3Q96PT4 AL162377.1-201ENST00000618844 1793 ntBASIC15.02□□□□□ -0.01
DUX3Q96PT4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
DUX3Q96PT4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
DUX3Q96PT4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
DUX3Q96PT4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.02□□□□□ -0.01
DUX3Q96PT4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
DUX3Q96PT4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
DUX3Q96PT4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
DUX3Q96PT4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.02□□□□□ -0.01
DUX3Q96PT4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
DUX3Q96PT4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
DUX3Q96PT4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
DUX3Q96PT4 LINC01521-201ENST00000504184 1943 ntBASIC15.02□□□□□ -0.01
DUX3Q96PT4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
DUX3Q96PT4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
DUX3Q96PT4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
DUX3Q96PT4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
DUX3Q96PT4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
DUX3Q96PT4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
DUX3Q96PT4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.01□□□□□ -0.01
DUX3Q96PT4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
DUX3Q96PT4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
DUX3Q96PT4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
DUX3Q96PT4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
DUX3Q96PT4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
DUX3Q96PT4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
DUX3Q96PT4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.01□□□□□ -0.01
DUX3Q96PT4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC15.01□□□□□ -0.01
DUX3Q96PT4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
DUX3Q96PT4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.01□□□□□ -0.01
DUX3Q96PT4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.01□□□□□ -0.01
DUX3Q96PT4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.01□□□□□ -0.01
DUX3Q96PT4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
DUX3Q96PT4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms