Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.96■□□□□ 0.79
RPRD1AQ96P16 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RPRD1AQ96P16 AL160286.2-201ENST00000567150 934 ntBASIC19.96■□□□□ 0.79
RPRD1AQ96P16 AC026271.3-201ENST00000571884 352 ntBASIC19.96■□□□□ 0.79
RPRD1AQ96P16 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.96■□□□□ 0.79
RPRD1AQ96P16 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPRD1AQ96P16 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPRD1AQ96P16 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.96■□□□□ 0.79
RPRD1AQ96P16 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.96■□□□□ 0.79
RPRD1AQ96P16 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
RPRD1AQ96P16 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.95■□□□□ 0.78
RPRD1AQ96P16 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.95■□□□□ 0.78
RPRD1AQ96P16 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RPRD1AQ96P16 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPRD1AQ96P16 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPRD1AQ96P16 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPRD1AQ96P16 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPRD1AQ96P16 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPRD1AQ96P16 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPRD1AQ96P16 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPRD1AQ96P16 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPRD1AQ96P16 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RPRD1AQ96P16 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.95■□□□□ 0.78
RPRD1AQ96P16 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.95■□□□□ 0.78
RPRD1AQ96P16 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.95■□□□□ 0.78
RPRD1AQ96P16 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPRD1AQ96P16 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPRD1AQ96P16 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPRD1AQ96P16 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.94■□□□□ 0.78
RPRD1AQ96P16 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
RPRD1AQ96P16 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPRD1AQ96P16 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPRD1AQ96P16 AL158211.5-201ENST00000623583 2518 ntBASIC19.94■□□□□ 0.78
RPRD1AQ96P16 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.94■□□□□ 0.78
RPRD1AQ96P16 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPRD1AQ96P16 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPRD1AQ96P16 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RPRD1AQ96P16 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RPRD1AQ96P16 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPRD1AQ96P16 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.94■□□□□ 0.78
RPRD1AQ96P16 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.94■□□□□ 0.78
RPRD1AQ96P16 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPRD1AQ96P16 REXO1L10P-201ENST00000615707 1290 ntBASIC19.94■□□□□ 0.78
RPRD1AQ96P16 REXO1L12P-201ENST00000622156 912 ntBASIC19.94■□□□□ 0.78
RPRD1AQ96P16 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RPRD1AQ96P16 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPRD1AQ96P16 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPRD1AQ96P16 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPRD1AQ96P16 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPRD1AQ96P16 ZNF815P-204ENST00000434898 1737 ntBASIC19.93■□□□□ 0.78
RPRD1AQ96P16 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPRD1AQ96P16 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPRD1AQ96P16 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPRD1AQ96P16 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPRD1AQ96P16 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPRD1AQ96P16 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.93■□□□□ 0.78
RPRD1AQ96P16 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.93■□□□□ 0.78
RPRD1AQ96P16 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.93■□□□□ 0.78
RPRD1AQ96P16 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.93■□□□□ 0.78
RPRD1AQ96P16 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.93■□□□□ 0.78
RPRD1AQ96P16 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.93■□□□□ 0.78
RPRD1AQ96P16 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
RPRD1AQ96P16 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.93■□□□□ 0.78
RPRD1AQ96P16 AL355075.4-201ENST00000554988 638 ntBASIC19.93■□□□□ 0.78
RPRD1AQ96P16 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.93■□□□□ 0.78
RPRD1AQ96P16 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.93■□□□□ 0.78
RPRD1AQ96P16 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RPRD1AQ96P16 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPRD1AQ96P16 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPRD1AQ96P16 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPRD1AQ96P16 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.93■□□□□ 0.78
RPRD1AQ96P16 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPRD1AQ96P16 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
RPRD1AQ96P16 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPRD1AQ96P16 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPRD1AQ96P16 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RPRD1AQ96P16 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPRD1AQ96P16 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPRD1AQ96P16 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.92■□□□□ 0.78
RPRD1AQ96P16 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RPRD1AQ96P16 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.92■□□□□ 0.78
RPRD1AQ96P16 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.92■□□□□ 0.78
RPRD1AQ96P16 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.92■□□□□ 0.78
RPRD1AQ96P16 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPRD1AQ96P16 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.92■□□□□ 0.78
RPRD1AQ96P16 AC116562.2-201ENST00000507042 360 ntBASIC19.92■□□□□ 0.78
RPRD1AQ96P16 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPRD1AQ96P16 MIR6786-201ENST00000616843 113 ntBASIC19.92■□□□□ 0.78
RPRD1AQ96P16 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RPRD1AQ96P16 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
RPRD1AQ96P16 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.92■□□□□ 0.78
RPRD1AQ96P16 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPRD1AQ96P16 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPRD1AQ96P16 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RPRD1AQ96P16 FSCN1P1-201ENST00000568912 1481 ntBASIC19.92■□□□□ 0.78
RPRD1AQ96P16 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPRD1AQ96P16 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.92■□□□□ 0.78
RPRD1AQ96P16 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPRD1AQ96P16 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPRD1AQ96P16 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms