Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ALPK3Q96L96 AC121338.2-201ENST00000622535 1744 ntBASIC21.16■□□□□ 0.98
ALPK3Q96L96 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ALPK3Q96L96 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ALPK3Q96L96 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ALPK3Q96L96 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ALPK3Q96L96 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.16■□□□□ 0.98
ALPK3Q96L96 AC034232.1-201ENST00000506026 1064 ntBASIC21.16■□□□□ 0.98
ALPK3Q96L96 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.16■□□□□ 0.98
ALPK3Q96L96 AC074051.2-201ENST00000565115 352 ntBASIC21.16■□□□□ 0.98
ALPK3Q96L96 AC138894.3-201ENST00000603787 634 ntBASIC21.16■□□□□ 0.98
ALPK3Q96L96 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ALPK3Q96L96 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.16■□□□□ 0.98
ALPK3Q96L96 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ALPK3Q96L96 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ALPK3Q96L96 IL9RP2-201ENST00000423948 1312 ntBASIC21.16■□□□□ 0.98
ALPK3Q96L96 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ALPK3Q96L96 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ALPK3Q96L96 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ALPK3Q96L96 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ALPK3Q96L96 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ALPK3Q96L96 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ALPK3Q96L96 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ALPK3Q96L96 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ALPK3Q96L96 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ALPK3Q96L96 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
ALPK3Q96L96 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
ALPK3Q96L96 LINC00167-201ENST00000530583 1419 ntBASIC21.15■□□□□ 0.98
ALPK3Q96L96 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.15■□□□□ 0.98
ALPK3Q96L96 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
ALPK3Q96L96 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ALPK3Q96L96 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ALPK3Q96L96 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ALPK3Q96L96 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ALPK3Q96L96 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ALPK3Q96L96 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.15■□□□□ 0.98
ALPK3Q96L96 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ALPK3Q96L96 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.15■□□□□ 0.98
ALPK3Q96L96 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.15■□□□□ 0.98
ALPK3Q96L96 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.15■□□□□ 0.98
ALPK3Q96L96 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC21.15■□□□□ 0.98
ALPK3Q96L96 AC117500.6-201ENST00000624871 588 ntBASIC21.15■□□□□ 0.98
ALPK3Q96L96 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ALPK3Q96L96 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ALPK3Q96L96 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ALPK3Q96L96 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
ALPK3Q96L96 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ALPK3Q96L96 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.14■□□□□ 0.98
ALPK3Q96L96 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ALPK3Q96L96 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.14■□□□□ 0.98
ALPK3Q96L96 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.14■□□□□ 0.98
ALPK3Q96L96 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
ALPK3Q96L96 LINC00265-3P-201ENST00000447588 903 ntBASIC21.14■□□□□ 0.98
ALPK3Q96L96 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.14■□□□□ 0.98
ALPK3Q96L96 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.14■□□□□ 0.98
ALPK3Q96L96 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
ALPK3Q96L96 AC244015.2-201ENST00000616358 1861 ntBASIC21.14■□□□□ 0.97
ALPK3Q96L96 AC079834.2-201ENST00000609776 1949 ntBASIC21.14■□□□□ 0.97
ALPK3Q96L96 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.14■□□□□ 0.97
ALPK3Q96L96 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ALPK3Q96L96 GUSBP5-202ENST00000510805 1989 ntBASIC21.14■□□□□ 0.97
ALPK3Q96L96 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.14■□□□□ 0.97
ALPK3Q96L96 FOSL1P1-201ENST00000511041 816 ntBASIC21.14■□□□□ 0.97
ALPK3Q96L96 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
ALPK3Q96L96 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ALPK3Q96L96 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ALPK3Q96L96 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.13■□□□□ 0.97
ALPK3Q96L96 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ALPK3Q96L96 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ALPK3Q96L96 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.13■□□□□ 0.97
ALPK3Q96L96 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.13■□□□□ 0.97
ALPK3Q96L96 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ALPK3Q96L96 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ALPK3Q96L96 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ALPK3Q96L96 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ALPK3Q96L96 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ALPK3Q96L96 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ALPK3Q96L96 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
ALPK3Q96L96 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
ALPK3Q96L96 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.12■□□□□ 0.97
ALPK3Q96L96 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.12■□□□□ 0.97
ALPK3Q96L96 AP000867.3-201ENST00000524675 377 ntBASIC21.12■□□□□ 0.97
ALPK3Q96L96 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.12■□□□□ 0.97
ALPK3Q96L96 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.12■□□□□ 0.97
ALPK3Q96L96 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ALPK3Q96L96 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ALPK3Q96L96 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ALPK3Q96L96 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ALPK3Q96L96 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ALPK3Q96L96 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ALPK3Q96L96 AL049796.1-201ENST00000565336 1766 ntBASIC21.12■□□□□ 0.97
ALPK3Q96L96 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ALPK3Q96L96 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ALPK3Q96L96 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ALPK3Q96L96 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC21.12■□□□□ 0.97
ALPK3Q96L96 AC092865.5-201ENST00000545435 363 ntBASIC21.12■□□□□ 0.97
ALPK3Q96L96 RNF126P1-202ENST00000569893 925 ntBASIC21.12■□□□□ 0.97
ALPK3Q96L96 AC011498.5-201ENST00000592027 486 ntBASIC21.12■□□□□ 0.97
ALPK3Q96L96 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ALPK3Q96L96 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms