Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC46Q96FV0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC46Q96FV0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC46Q96FV0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRC46Q96FV0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LRRC46Q96FV0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
LRRC46Q96FV0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
LRRC46Q96FV0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
LRRC46Q96FV0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
LRRC46Q96FV0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC46Q96FV0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC46Q96FV0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC46Q96FV0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC46Q96FV0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
LRRC46Q96FV0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRC46Q96FV0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
LRRC46Q96FV0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.39■□□□□ 0.37
LRRC46Q96FV0 MIR1238-201ENST00000408483 83 ntBASIC17.39■□□□□ 0.37
LRRC46Q96FV0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.39■□□□□ 0.37
LRRC46Q96FV0 REXO1L10P-201ENST00000615707 1290 ntBASIC17.39■□□□□ 0.37
LRRC46Q96FV0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
LRRC46Q96FV0 KRT18P22-201ENST00000402024 1347 ntBASIC17.39■□□□□ 0.37
LRRC46Q96FV0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC46Q96FV0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRC46Q96FV0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC46Q96FV0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC46Q96FV0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LRRC46Q96FV0 AC018445.3-201ENST00000624177 1945 ntBASIC17.39■□□□□ 0.37
LRRC46Q96FV0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC46Q96FV0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 BCL2-203ENST00000589955 5011 ntBASIC17.38■□□□□ 0.37
LRRC46Q96FV0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC46Q96FV0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 MIR6786-201ENST00000616843 113 ntBASIC17.37■□□□□ 0.37
LRRC46Q96FV0 AL590326.2-201ENST00000625139 305 ntBASIC17.37■□□□□ 0.37
LRRC46Q96FV0 AC092865.7-201ENST00000641832 219 ntBASIC17.37■□□□□ 0.37
LRRC46Q96FV0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 LINC01568-207ENST00000641790 1380 ntBASIC17.37■□□□□ 0.37
LRRC46Q96FV0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC46Q96FV0 FSCN1P1-201ENST00000568912 1481 ntBASIC17.37■□□□□ 0.37
LRRC46Q96FV0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 PTBP1P-201ENST00000554374 1601 ntBASIC17.36■□□□□ 0.37
LRRC46Q96FV0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 RCN1P1-201ENST00000400413 996 ntBASIC17.36■□□□□ 0.37
LRRC46Q96FV0 AC116562.2-201ENST00000507042 360 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms