Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXRED1Q96CU9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.81■□□□□ 0.28
FOXRED1Q96CU9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXRED1Q96CU9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXRED1Q96CU9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXRED1Q96CU9 AL161938.1-201ENST00000569833 2180 ntBASIC16.81■□□□□ 0.28
FOXRED1Q96CU9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
FOXRED1Q96CU9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.81■□□□□ 0.28
FOXRED1Q96CU9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXRED1Q96CU9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
FOXRED1Q96CU9 AC116351.2-201ENST00000606540 1585 ntBASIC16.81■□□□□ 0.28
FOXRED1Q96CU9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.81■□□□□ 0.28
FOXRED1Q96CU9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FOXRED1Q96CU9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 CROCCP5-201ENST00000436658 830 ntBASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXRED1Q96CU9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 AL121832.2-201ENST00000610979 668 ntBASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 OR10C1-204ENST00000622521 1039 ntBASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.79■□□□□ 0.28
FOXRED1Q96CU9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 AC133552.2-202ENST00000575694 574 ntBASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXRED1Q96CU9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXRED1Q96CU9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXRED1Q96CU9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXRED1Q96CU9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms