Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SCAMP4Q969E2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCAMP4Q969E2 B3GAT3P1-201ENST00000471720 806 ntBASIC19.23■□□□□ 0.67
SCAMP4Q969E2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.23■□□□□ 0.67
SCAMP4Q969E2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.23■□□□□ 0.67
SCAMP4Q969E2 MIR6786-201ENST00000616843 113 ntBASIC19.23■□□□□ 0.67
SCAMP4Q969E2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.23■□□□□ 0.67
SCAMP4Q969E2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAMP4Q969E2 AC104417.2-201ENST00000562989 1793 ntBASIC19.23■□□□□ 0.67
SCAMP4Q969E2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAMP4Q969E2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCAMP4Q969E2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.23■□□□□ 0.67
SCAMP4Q969E2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAMP4Q969E2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SCAMP4Q969E2 RCC2P6-201ENST00000526625 1557 ntBASIC19.23■□□□□ 0.67
SCAMP4Q969E2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCAMP4Q969E2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SCAMP4Q969E2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SCAMP4Q969E2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAMP4Q969E2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAMP4Q969E2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SCAMP4Q969E2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAMP4Q969E2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAMP4Q969E2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAMP4Q969E2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCAMP4Q969E2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAMP4Q969E2 AC008040.2-201ENST00000461049 708 ntBASIC19.22■□□□□ 0.67
SCAMP4Q969E2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCAMP4Q969E2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.22■□□□□ 0.67
SCAMP4Q969E2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SCAMP4Q969E2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.22■□□□□ 0.67
SCAMP4Q969E2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAMP4Q969E2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAMP4Q969E2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SCAMP4Q969E2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SCAMP4Q969E2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAMP4Q969E2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCAMP4Q969E2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCAMP4Q969E2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.21■□□□□ 0.67
SCAMP4Q969E2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SCAMP4Q969E2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCAMP4Q969E2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SCAMP4Q969E2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.21■□□□□ 0.67
SCAMP4Q969E2 RBM17P1-201ENST00000453646 1190 ntBASIC19.21■□□□□ 0.67
SCAMP4Q969E2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.21■□□□□ 0.67
SCAMP4Q969E2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.21■□□□□ 0.67
SCAMP4Q969E2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.21■□□□□ 0.67
SCAMP4Q969E2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
SCAMP4Q969E2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.21■□□□□ 0.67
SCAMP4Q969E2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
SCAMP4Q969E2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCAMP4Q969E2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SCAMP4Q969E2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCAMP4Q969E2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.21■□□□□ 0.67
SCAMP4Q969E2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.21■□□□□ 0.67
SCAMP4Q969E2 FSCN1P1-201ENST00000568912 1481 ntBASIC19.21■□□□□ 0.67
SCAMP4Q969E2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCAMP4Q969E2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 SDHAP1-207ENST00000440850 2000 ntBASIC19.2■□□□□ 0.66
SCAMP4Q969E2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.2■□□□□ 0.66
SCAMP4Q969E2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 BX088651.1-201ENST00000540551 451 ntBASIC19.2■□□□□ 0.66
SCAMP4Q969E2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 AC130371.2-201ENST00000619443 611 ntBASIC19.2■□□□□ 0.66
SCAMP4Q969E2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 AC079598.2-202ENST00000546624 1451 ntBASIC19.2■□□□□ 0.66
SCAMP4Q969E2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCAMP4Q969E2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms