Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTCD2Q8WV60 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTCD2Q8WV60 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTCD2Q8WV60 KRT8P8-201ENST00000434750 1448 ntBASIC19.58■□□□□ 0.72
PTCD2Q8WV60 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTCD2Q8WV60 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.58■□□□□ 0.72
PTCD2Q8WV60 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PTCD2Q8WV60 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTCD2Q8WV60 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PTCD2Q8WV60 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 KRT18P16-201ENST00000510337 1294 ntBASIC19.56■□□□□ 0.72
PTCD2Q8WV60 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PTCD2Q8WV60 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PTCD2Q8WV60 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.55■□□□□ 0.72
PTCD2Q8WV60 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
PTCD2Q8WV60 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PTCD2Q8WV60 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.55■□□□□ 0.72
PTCD2Q8WV60 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCD2Q8WV60 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.55■□□□□ 0.72
PTCD2Q8WV60 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCD2Q8WV60 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCD2Q8WV60 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCD2Q8WV60 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCD2Q8WV60 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCD2Q8WV60 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.55■□□□□ 0.72
PTCD2Q8WV60 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTCD2Q8WV60 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCD2Q8WV60 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.55■□□□□ 0.72
PTCD2Q8WV60 PRKY-204ENST00000533551 1019 ntBASIC19.55■□□□□ 0.72
PTCD2Q8WV60 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.55■□□□□ 0.72
PTCD2Q8WV60 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCD2Q8WV60 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.55■□□□□ 0.72
PTCD2Q8WV60 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.55■□□□□ 0.72
PTCD2Q8WV60 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PTCD2Q8WV60 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCD2Q8WV60 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCD2Q8WV60 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCD2Q8WV60 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCD2Q8WV60 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCD2Q8WV60 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCD2Q8WV60 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTCD2Q8WV60 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms