Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 RNA5SP413-201ENST00000516373 109 ntBASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.12■□□□□ 0.81
CCHCR1Q8TD31 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCHCR1Q8TD31 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.1■□□□□ 0.81
CCHCR1Q8TD31 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms