Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.53■□□□□ 0.4
CHD6Q8TD26 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHD6Q8TD26 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHD6Q8TD26 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.52■□□□□ 0.4
CHD6Q8TD26 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHD6Q8TD26 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHD6Q8TD26 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHD6Q8TD26 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHD6Q8TD26 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHD6Q8TD26 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHD6Q8TD26 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHD6Q8TD26 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHD6Q8TD26 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CHD6Q8TD26 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.52■□□□□ 0.39
CHD6Q8TD26 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHD6Q8TD26 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHD6Q8TD26 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD6Q8TD26 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD6Q8TD26 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD6Q8TD26 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.51■□□□□ 0.39
CHD6Q8TD26 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.51■□□□□ 0.39
CHD6Q8TD26 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHD6Q8TD26 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD6Q8TD26 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD6Q8TD26 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD6Q8TD26 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.51■□□□□ 0.39
CHD6Q8TD26 KRT18P3-201ENST00000451602 1288 ntBASIC17.51■□□□□ 0.39
CHD6Q8TD26 MEIS3P1-201ENST00000495167 958 ntBASIC17.51■□□□□ 0.39
CHD6Q8TD26 AC138761.1-201ENST00000584393 385 ntBASIC17.51■□□□□ 0.39
CHD6Q8TD26 AC116407.3-201ENST00000623905 1129 ntBASIC17.51■□□□□ 0.39
CHD6Q8TD26 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD6Q8TD26 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHD6Q8TD26 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CHD6Q8TD26 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CHD6Q8TD26 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHD6Q8TD26 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHD6Q8TD26 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.5■□□□□ 0.39
CHD6Q8TD26 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.5■□□□□ 0.39
CHD6Q8TD26 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHD6Q8TD26 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.5■□□□□ 0.39
CHD6Q8TD26 AC040169.1-201ENST00000565382 521 ntBASIC17.5■□□□□ 0.39
CHD6Q8TD26 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHD6Q8TD26 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHD6Q8TD26 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHD6Q8TD26 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CHD6Q8TD26 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHD6Q8TD26 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.5■□□□□ 0.39
CHD6Q8TD26 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHD6Q8TD26 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.5■□□□□ 0.39
CHD6Q8TD26 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHD6Q8TD26 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CHD6Q8TD26 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.5■□□□□ 0.39
CHD6Q8TD26 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHD6Q8TD26 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.5■□□□□ 0.39
CHD6Q8TD26 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.5■□□□□ 0.39
CHD6Q8TD26 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHD6Q8TD26 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHD6Q8TD26 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHD6Q8TD26 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.5■□□□□ 0.39
CHD6Q8TD26 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHD6Q8TD26 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.49■□□□□ 0.39
CHD6Q8TD26 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.49■□□□□ 0.39
CHD6Q8TD26 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.49■□□□□ 0.39
CHD6Q8TD26 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.49■□□□□ 0.39
CHD6Q8TD26 FAM215A-202ENST00000632077 792 ntBASIC17.49■□□□□ 0.39
CHD6Q8TD26 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.49■□□□□ 0.39
CHD6Q8TD26 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHD6Q8TD26 TFP1-202ENST00000475455 1573 ntBASIC17.49■□□□□ 0.39
CHD6Q8TD26 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHD6Q8TD26 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.49■□□□□ 0.39
CHD6Q8TD26 GAPDHP21-201ENST00000450301 1010 ntBASIC17.49■□□□□ 0.39
CHD6Q8TD26 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.49■□□□□ 0.39
CHD6Q8TD26 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.49■□□□□ 0.39
CHD6Q8TD26 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.49■□□□□ 0.39
CHD6Q8TD26 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.49■□□□□ 0.39
CHD6Q8TD26 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHD6Q8TD26 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHD6Q8TD26 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHD6Q8TD26 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CHD6Q8TD26 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHD6Q8TD26 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHD6Q8TD26 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHD6Q8TD26 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.49■□□□□ 0.39
CHD6Q8TD26 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHD6Q8TD26 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHD6Q8TD26 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHD6Q8TD26 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.49■□□□□ 0.39
CHD6Q8TD26 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHD6Q8TD26 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.49■□□□□ 0.39
CHD6Q8TD26 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHD6Q8TD26 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.49■□□□□ 0.39
CHD6Q8TD26 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.49■□□□□ 0.39
CHD6Q8TD26 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CHD6Q8TD26 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CHD6Q8TD26 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD6Q8TD26 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.48■□□□□ 0.39
CHD6Q8TD26 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.48■□□□□ 0.39
CHD6Q8TD26 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD6Q8TD26 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CHD6Q8TD26 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms