Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 AC233992.3-201ENST00000607491 485 ntBASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 MKRN4P-201ENST00000444706 1521 ntBASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM11BQ8TCY0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 AC139713.2-201ENST00000641328 2723 ntBASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 KRT8P17-201ENST00000453110 1448 ntBASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC12.56□□□□□ -0.4
SMIM11BQ8TCY0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 PGM5P4-201ENST00000421970 445 ntBASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 AC138907.5-202ENST00000569484 235 ntBASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM11BQ8TCY0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 AL512353.2-201ENST00000448759 1962 ntBASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms