Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.51■□□□□ 0.87
UBA3Q8TBC4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.51■□□□□ 0.87
UBA3Q8TBC4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBA3Q8TBC4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBA3Q8TBC4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBA3Q8TBC4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBA3Q8TBC4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.5■□□□□ 0.87
UBA3Q8TBC4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBA3Q8TBC4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBA3Q8TBC4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.5■□□□□ 0.87
UBA3Q8TBC4 AL353807.1-201ENST00000427475 662 ntBASIC20.5■□□□□ 0.87
UBA3Q8TBC4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UBA3Q8TBC4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.5■□□□□ 0.87
UBA3Q8TBC4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
UBA3Q8TBC4 CR392000.1-201ENST00000624770 1228 ntBASIC20.5■□□□□ 0.87
UBA3Q8TBC4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.5■□□□□ 0.87
UBA3Q8TBC4 AP006294.2-201ENST00000641667 209 ntBASIC20.5■□□□□ 0.87
UBA3Q8TBC4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBA3Q8TBC4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.5■□□□□ 0.87
UBA3Q8TBC4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.5■□□□□ 0.87
UBA3Q8TBC4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
UBA3Q8TBC4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBA3Q8TBC4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBA3Q8TBC4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.5■□□□□ 0.87
UBA3Q8TBC4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBA3Q8TBC4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBA3Q8TBC4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.49■□□□□ 0.87
UBA3Q8TBC4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBA3Q8TBC4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBA3Q8TBC4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBA3Q8TBC4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBA3Q8TBC4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBA3Q8TBC4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBA3Q8TBC4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.49■□□□□ 0.87
UBA3Q8TBC4 FAM197Y1-201ENST00000421178 764 ntBASIC20.49■□□□□ 0.87
UBA3Q8TBC4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBA3Q8TBC4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.49■□□□□ 0.87
UBA3Q8TBC4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBA3Q8TBC4 AL353708.3-201ENST00000610272 989 ntBASIC20.49■□□□□ 0.87
UBA3Q8TBC4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.49■□□□□ 0.87
UBA3Q8TBC4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBA3Q8TBC4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
UBA3Q8TBC4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBA3Q8TBC4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBA3Q8TBC4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBA3Q8TBC4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBA3Q8TBC4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBA3Q8TBC4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBA3Q8TBC4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 SDHAP1-207ENST00000440850 2000 ntBASIC20.48■□□□□ 0.87
UBA3Q8TBC4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 AL135905.2-201ENST00000584934 1404 ntBASIC20.48■□□□□ 0.87
UBA3Q8TBC4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 AC233702.5-201ENST00000584107 538 ntBASIC20.48■□□□□ 0.87
UBA3Q8TBC4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 AC073195.1-201ENST00000607241 877 ntBASIC20.48■□□□□ 0.87
UBA3Q8TBC4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBA3Q8TBC4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
UBA3Q8TBC4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.47■□□□□ 0.87
UBA3Q8TBC4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
UBA3Q8TBC4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBA3Q8TBC4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
UBA3Q8TBC4 KSR1P1-201ENST00000446298 240 ntBASIC20.47■□□□□ 0.87
UBA3Q8TBC4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.47■□□□□ 0.87
UBA3Q8TBC4 AL445675.2-201ENST00000620291 557 ntBASIC20.47■□□□□ 0.87
UBA3Q8TBC4 AC113410.3-201ENST00000623366 203 ntBASIC20.47■□□□□ 0.87
UBA3Q8TBC4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
UBA3Q8TBC4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.47■□□□□ 0.87
UBA3Q8TBC4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBA3Q8TBC4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
UBA3Q8TBC4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.47■□□□□ 0.87
UBA3Q8TBC4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
UBA3Q8TBC4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
UBA3Q8TBC4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
UBA3Q8TBC4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.47■□□□□ 0.87
UBA3Q8TBC4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms