Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TTC16Q8NEE8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
TTC16Q8NEE8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TTC16Q8NEE8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC16Q8NEE8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TTC16Q8NEE8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC16Q8NEE8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC16Q8NEE8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC16Q8NEE8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC16Q8NEE8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC16Q8NEE8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC16Q8NEE8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TTC16Q8NEE8 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.29■□□□□ 0.84
TTC16Q8NEE8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.29■□□□□ 0.84
TTC16Q8NEE8 SLC25A1P4-201ENST00000567977 778 ntBASIC20.29■□□□□ 0.84
TTC16Q8NEE8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.29■□□□□ 0.84
TTC16Q8NEE8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC16Q8NEE8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC16Q8NEE8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC16Q8NEE8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TTC16Q8NEE8 FSCN1P1-201ENST00000568912 1481 ntBASIC20.29■□□□□ 0.84
TTC16Q8NEE8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC16Q8NEE8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC16Q8NEE8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TTC16Q8NEE8 AC112907.3-201ENST00000577781 2400 ntBASIC20.28■□□□□ 0.84
TTC16Q8NEE8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.28■□□□□ 0.84
TTC16Q8NEE8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.28■□□□□ 0.84
TTC16Q8NEE8 AC020763.4-201ENST00000623414 4170 ntBASIC20.28■□□□□ 0.84
TTC16Q8NEE8 LINC01465-201ENST00000408887 1940 ntBASIC20.28■□□□□ 0.84
TTC16Q8NEE8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TTC16Q8NEE8 AL691432.2-201ENST00000607222 2038 ntBASIC20.28■□□□□ 0.84
TTC16Q8NEE8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC16Q8NEE8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
TTC16Q8NEE8 AC011506.1-201ENST00000474329 610 ntBASIC20.28■□□□□ 0.84
TTC16Q8NEE8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
TTC16Q8NEE8 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.28■□□□□ 0.84
TTC16Q8NEE8 AL445675.2-201ENST00000620291 557 ntBASIC20.28■□□□□ 0.84
TTC16Q8NEE8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TTC16Q8NEE8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TTC16Q8NEE8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC16Q8NEE8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TTC16Q8NEE8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC16Q8NEE8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC16Q8NEE8 FEM1AP1-201ENST00000431297 1995 ntBASIC20.28■□□□□ 0.84
TTC16Q8NEE8 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TTC16Q8NEE8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.28■□□□□ 0.84
TTC16Q8NEE8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TTC16Q8NEE8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.27■□□□□ 0.84
TTC16Q8NEE8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.27■□□□□ 0.84
TTC16Q8NEE8 TMEM179-206ENST00000616017 1645 ntBASIC20.27■□□□□ 0.84
TTC16Q8NEE8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC16Q8NEE8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TTC16Q8NEE8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC16Q8NEE8 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC16Q8NEE8 AC005521.1-201ENST00000393351 872 ntBASIC20.27■□□□□ 0.84
TTC16Q8NEE8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.27■□□□□ 0.84
TTC16Q8NEE8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.27■□□□□ 0.84
TTC16Q8NEE8 AC145285.6-201ENST00000604632 637 ntBASIC20.27■□□□□ 0.84
TTC16Q8NEE8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TTC16Q8NEE8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC16Q8NEE8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC16Q8NEE8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC16Q8NEE8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.27■□□□□ 0.84
TTC16Q8NEE8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TTC16Q8NEE8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TTC16Q8NEE8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TTC16Q8NEE8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TTC16Q8NEE8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
TTC16Q8NEE8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 AC004980.1-204ENST00000429707 299 ntBASIC20.26■□□□□ 0.83
TTC16Q8NEE8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 B3GAT3P1-201ENST00000471720 806 ntBASIC20.26■□□□□ 0.83
TTC16Q8NEE8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 AC097488.1-201ENST00000507834 756 ntBASIC20.26■□□□□ 0.83
TTC16Q8NEE8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 FITM1-202ENST00000559294 800 ntBASIC20.26■□□□□ 0.83
TTC16Q8NEE8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.26■□□□□ 0.83
TTC16Q8NEE8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 AC010947.1-201ENST00000623454 693 ntBASIC20.26■□□□□ 0.83
TTC16Q8NEE8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 AP005212.1-201ENST00000581547 1997 ntBASIC20.26■□□□□ 0.83
TTC16Q8NEE8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TTC16Q8NEE8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms