Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SIMC1Q8NDZ2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIMC1Q8NDZ2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIMC1Q8NDZ2 NBPF21P-201ENST00000425093 1451 ntBASIC18.21■□□□□ 0.51
SIMC1Q8NDZ2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.21■□□□□ 0.51
SIMC1Q8NDZ2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIMC1Q8NDZ2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.21■□□□□ 0.51
SIMC1Q8NDZ2 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SIMC1Q8NDZ2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.21■□□□□ 0.51
SIMC1Q8NDZ2 YBX1P10-201ENST00000444752 975 ntBASIC18.21■□□□□ 0.51
SIMC1Q8NDZ2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.21■□□□□ 0.51
SIMC1Q8NDZ2 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.21■□□□□ 0.51
SIMC1Q8NDZ2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SIMC1Q8NDZ2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SIMC1Q8NDZ2 AC124016.1-201ENST00000609552 612 ntBASIC18.21■□□□□ 0.51
SIMC1Q8NDZ2 ITM2C-210ENST00000620962 501 ntBASIC18.21■□□□□ 0.51
SIMC1Q8NDZ2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIMC1Q8NDZ2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.21■□□□□ 0.51
SIMC1Q8NDZ2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SIMC1Q8NDZ2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.21■□□□□ 0.51
SIMC1Q8NDZ2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIMC1Q8NDZ2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 KRT18P16-201ENST00000510337 1294 ntBASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 PRKY-204ENST00000533551 1019 ntBASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SIMC1Q8NDZ2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 KRT18P29-201ENST00000397031 1267 ntBASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 AC239809.2-201ENST00000415381 517 ntBASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 AC098590.1-201ENST00000468126 897 ntBASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 C1QBPP2-201ENST00000528754 825 ntBASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIMC1Q8NDZ2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms