Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 TPSP2-201ENST00000561760 610 ntBASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC168Q8NDH2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 AL024507.2-201ENST00000606070 2574 ntBASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC168Q8NDH2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 AL031284.1-201ENST00000419297 478 ntBASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 TOB2P1-201ENST00000469761 992 ntBASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 AL121772.3-201ENST00000610840 674 ntBASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 REXO1L6P-202ENST00000619970 1078 ntBASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC168Q8NDH2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC168Q8NDH2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.14■□□□□ 0.18
CCDC168Q8NDH2 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
CCDC168Q8NDH2 AL353801.3-201ENST00000609898 542 ntBASIC16.14■□□□□ 0.18
CCDC168Q8NDH2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.14■□□□□ 0.18
CCDC168Q8NDH2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC168Q8NDH2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC168Q8NDH2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC168Q8NDH2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC168Q8NDH2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC168Q8NDH2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CCDC168Q8NDH2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC168Q8NDH2 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.14■□□□□ 0.17
CCDC168Q8NDH2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC168Q8NDH2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
CCDC168Q8NDH2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms