Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 AL032819.2-201ENST00000624543 2162 ntBASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9CQ8N5M4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 CD99P1-205ENST00000527459 561 ntBASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.27■□□□□ 0.04
TTC9CQ8N5M4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TTC9CQ8N5M4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TTC9CQ8N5M4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TTC9CQ8N5M4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TTC9CQ8N5M4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TTC9CQ8N5M4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TTC9CQ8N5M4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TTC9CQ8N5M4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TTC9CQ8N5M4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 AC090340.1-201ENST00000620778 4980 ntBASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms