Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TTC39CQ8N584 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
TTC39CQ8N584 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TTC39CQ8N584 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TTC39CQ8N584 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TTC39CQ8N584 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TTC39CQ8N584 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.58■□□□□ 0.89
TTC39CQ8N584 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.58■□□□□ 0.89
TTC39CQ8N584 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.58■□□□□ 0.89
TTC39CQ8N584 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TTC39CQ8N584 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TTC39CQ8N584 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.58■□□□□ 0.88
TTC39CQ8N584 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TTC39CQ8N584 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TTC39CQ8N584 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC39CQ8N584 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.57■□□□□ 0.88
TTC39CQ8N584 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.57■□□□□ 0.88
TTC39CQ8N584 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.57■□□□□ 0.88
TTC39CQ8N584 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
TTC39CQ8N584 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
TTC39CQ8N584 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.57■□□□□ 0.88
TTC39CQ8N584 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC39CQ8N584 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TTC39CQ8N584 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TTC39CQ8N584 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.57■□□□□ 0.88
TTC39CQ8N584 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC39CQ8N584 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TTC39CQ8N584 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TTC39CQ8N584 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TTC39CQ8N584 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC39CQ8N584 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC39CQ8N584 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC39CQ8N584 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC39CQ8N584 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.57■□□□□ 0.88
TTC39CQ8N584 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.57■□□□□ 0.88
TTC39CQ8N584 AC113410.3-201ENST00000623366 203 ntBASIC20.57■□□□□ 0.88
TTC39CQ8N584 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC39CQ8N584 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC39CQ8N584 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TTC39CQ8N584 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TTC39CQ8N584 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC39CQ8N584 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC39CQ8N584 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TTC39CQ8N584 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TTC39CQ8N584 Z82202.1-201ENST00000623446 1880 ntBASIC20.56■□□□□ 0.88
TTC39CQ8N584 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.56■□□□□ 0.88
TTC39CQ8N584 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC39CQ8N584 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.56■□□□□ 0.88
TTC39CQ8N584 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.56■□□□□ 0.88
TTC39CQ8N584 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC39CQ8N584 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC39CQ8N584 FAM197Y1-201ENST00000421178 764 ntBASIC20.56■□□□□ 0.88
TTC39CQ8N584 TSPY21P-201ENST00000433481 731 ntBASIC20.56■□□□□ 0.88
TTC39CQ8N584 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.56■□□□□ 0.88
TTC39CQ8N584 Z85996.1-201ENST00000494644 937 ntBASIC20.56■□□□□ 0.88
TTC39CQ8N584 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.56■□□□□ 0.88
TTC39CQ8N584 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.56■□□□□ 0.88
TTC39CQ8N584 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.56■□□□□ 0.88
TTC39CQ8N584 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.56■□□□□ 0.88
TTC39CQ8N584 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.56■□□□□ 0.88
TTC39CQ8N584 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.56■□□□□ 0.88
TTC39CQ8N584 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC39CQ8N584 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.56■□□□□ 0.88
TTC39CQ8N584 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TTC39CQ8N584 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC39CQ8N584 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.56■□□□□ 0.88
TTC39CQ8N584 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC39CQ8N584 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC39CQ8N584 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
TTC39CQ8N584 RNF165-205ENST00000588679 2904 ntBASIC20.56■□□□□ 0.88
TTC39CQ8N584 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC39CQ8N584 FSCN1P1-201ENST00000568912 1481 ntBASIC20.56■□□□□ 0.88
TTC39CQ8N584 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39CQ8N584 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39CQ8N584 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TTC39CQ8N584 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.55■□□□□ 0.88
TTC39CQ8N584 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39CQ8N584 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39CQ8N584 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39CQ8N584 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39CQ8N584 SLC25A24-204ENST00000569674 2357 ntBASIC20.55■□□□□ 0.88
TTC39CQ8N584 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39CQ8N584 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39CQ8N584 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.55■□□□□ 0.88
TTC39CQ8N584 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.55■□□□□ 0.88
TTC39CQ8N584 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.55■□□□□ 0.88
TTC39CQ8N584 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39CQ8N584 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.55■□□□□ 0.88
TTC39CQ8N584 NUDT16P1-203ENST00000513809 620 ntBASIC20.55■□□□□ 0.88
TTC39CQ8N584 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39CQ8N584 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.55■□□□□ 0.88
TTC39CQ8N584 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.55■□□□□ 0.88
TTC39CQ8N584 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.55■□□□□ 0.88
TTC39CQ8N584 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.55■□□□□ 0.88
TTC39CQ8N584 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.55■□□□□ 0.88
TTC39CQ8N584 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
TTC39CQ8N584 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39CQ8N584 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39CQ8N584 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39CQ8N584 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms