Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
ABCA6Q8N139 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC28.76■■■□□ 2.19
ABCA6Q8N139 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC28.76■■■□□ 2.19
ABCA6Q8N139 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC28.76■■■□□ 2.19
ABCA6Q8N139 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
ABCA6Q8N139 SLC25A6P4-201ENST00000586535 553 ntBASIC28.76■■■□□ 2.19
ABCA6Q8N139 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC28.76■■■□□ 2.19
ABCA6Q8N139 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
ABCA6Q8N139 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
ABCA6Q8N139 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
ABCA6Q8N139 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
ABCA6Q8N139 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
ABCA6Q8N139 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
ABCA6Q8N139 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
ABCA6Q8N139 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC28.75■■■□□ 2.19
ABCA6Q8N139 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC28.75■■■□□ 2.19
ABCA6Q8N139 AC104692.2-201ENST00000603054 253 ntBASIC28.75■■■□□ 2.19
ABCA6Q8N139 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
ABCA6Q8N139 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
ABCA6Q8N139 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
ABCA6Q8N139 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
ABCA6Q8N139 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
ABCA6Q8N139 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
ABCA6Q8N139 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
ABCA6Q8N139 BUB3-202ENST00000368859 667 ntTSL 3 BASIC28.74■■■□□ 2.19
ABCA6Q8N139 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC28.74■■■□□ 2.19
ABCA6Q8N139 AP002414.4-201ENST00000589764 1148 ntBASIC28.74■■■□□ 2.19
ABCA6Q8N139 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
ABCA6Q8N139 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
ABCA6Q8N139 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
ABCA6Q8N139 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
ABCA6Q8N139 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
ABCA6Q8N139 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC28.74■■■□□ 2.19
ABCA6Q8N139 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
ABCA6Q8N139 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
ABCA6Q8N139 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
ABCA6Q8N139 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
ABCA6Q8N139 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
ABCA6Q8N139 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC28.73■■■□□ 2.19
ABCA6Q8N139 BX276092.5-203ENST00000456199 560 ntBASIC28.73■■■□□ 2.19
ABCA6Q8N139 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
ABCA6Q8N139 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
ABCA6Q8N139 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
ABCA6Q8N139 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC28.73■■■□□ 2.19
ABCA6Q8N139 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC28.73■■■□□ 2.19
ABCA6Q8N139 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC28.72■■■□□ 2.19
ABCA6Q8N139 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC28.72■■■□□ 2.19
ABCA6Q8N139 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
ABCA6Q8N139 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC28.72■■■□□ 2.19
ABCA6Q8N139 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
ABCA6Q8N139 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC28.72■■■□□ 2.19
ABCA6Q8N139 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
ABCA6Q8N139 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
ABCA6Q8N139 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
ABCA6Q8N139 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
ABCA6Q8N139 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC28.72■■■□□ 2.19
ABCA6Q8N139 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC28.72■■■□□ 2.19
ABCA6Q8N139 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC28.72■■■□□ 2.19
ABCA6Q8N139 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
ABCA6Q8N139 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC28.71■■■□□ 2.19
ABCA6Q8N139 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC28.71■■■□□ 2.19
ABCA6Q8N139 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC28.71■■■□□ 2.19
ABCA6Q8N139 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
ABCA6Q8N139 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ABCA6Q8N139 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC28.71■■■□□ 2.19
ABCA6Q8N139 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC28.71■■■□□ 2.19
ABCA6Q8N139 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
ABCA6Q8N139 AC034232.1-201ENST00000506026 1064 ntBASIC28.71■■■□□ 2.19
ABCA6Q8N139 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
ABCA6Q8N139 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC28.71■■■□□ 2.19
ABCA6Q8N139 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC28.71■■■□□ 2.19
ABCA6Q8N139 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
ABCA6Q8N139 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC28.71■■■□□ 2.19
ABCA6Q8N139 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
ABCA6Q8N139 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC28.71■■■□□ 2.19
ABCA6Q8N139 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.19
ABCA6Q8N139 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC28.7■■■□□ 2.19
ABCA6Q8N139 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
ABCA6Q8N139 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC28.7■■■□□ 2.19
ABCA6Q8N139 CHCHD2P8-201ENST00000429873 447 ntBASIC28.7■■■□□ 2.19
ABCA6Q8N139 AC006538.3-201ENST00000612495 578 ntBASIC28.7■■■□□ 2.19
ABCA6Q8N139 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
ABCA6Q8N139 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
ABCA6Q8N139 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
ABCA6Q8N139 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
ABCA6Q8N139 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC28.7■■■□□ 2.18
ABCA6Q8N139 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
ABCA6Q8N139 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC28.7■■■□□ 2.18
ABCA6Q8N139 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ABCA6Q8N139 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC28.69■■■□□ 2.18
ABCA6Q8N139 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC28.69■■■□□ 2.18
ABCA6Q8N139 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC28.69■■■□□ 2.18
ABCA6Q8N139 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC28.69■■■□□ 2.18
ABCA6Q8N139 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ABCA6Q8N139 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ABCA6Q8N139 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
ABCA6Q8N139 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC28.69■■■□□ 2.18
ABCA6Q8N139 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC28.69■■■□□ 2.18
ABCA6Q8N139 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC28.69■■■□□ 2.18
ABCA6Q8N139 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC28.69■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms