Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DHX40Q8IX18 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
DHX40Q8IX18 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DHX40Q8IX18 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.5■■□□□ 1.03
DHX40Q8IX18 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DHX40Q8IX18 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DHX40Q8IX18 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DHX40Q8IX18 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DHX40Q8IX18 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.5■■□□□ 1.03
DHX40Q8IX18 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
DHX40Q8IX18 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
DHX40Q8IX18 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DHX40Q8IX18 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DHX40Q8IX18 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.5■■□□□ 1.03
DHX40Q8IX18 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.5■■□□□ 1.03
DHX40Q8IX18 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
DHX40Q8IX18 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.5■■□□□ 1.03
DHX40Q8IX18 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DHX40Q8IX18 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
DHX40Q8IX18 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
DHX40Q8IX18 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.49■■□□□ 1.03
DHX40Q8IX18 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DHX40Q8IX18 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DHX40Q8IX18 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DHX40Q8IX18 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
DHX40Q8IX18 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DHX40Q8IX18 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DHX40Q8IX18 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DHX40Q8IX18 AL512625.2-201ENST00000417533 625 ntBASIC21.49■■□□□ 1.03
DHX40Q8IX18 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.49■■□□□ 1.03
DHX40Q8IX18 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.49■■□□□ 1.03
DHX40Q8IX18 AC231657.2-201ENST00000624556 255 ntBASIC21.49■■□□□ 1.03
DHX40Q8IX18 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.49■■□□□ 1.03
DHX40Q8IX18 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DHX40Q8IX18 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
DHX40Q8IX18 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.49■■□□□ 1.03
DHX40Q8IX18 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
DHX40Q8IX18 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DHX40Q8IX18 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DHX40Q8IX18 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DHX40Q8IX18 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DHX40Q8IX18 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DHX40Q8IX18 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.49■■□□□ 1.03
DHX40Q8IX18 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.48■■□□□ 1.03
DHX40Q8IX18 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
DHX40Q8IX18 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
DHX40Q8IX18 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
DHX40Q8IX18 BICD1-207ENST00000551848 1962 ntBASIC21.48■■□□□ 1.03
DHX40Q8IX18 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DHX40Q8IX18 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DHX40Q8IX18 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.48■■□□□ 1.03
DHX40Q8IX18 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DHX40Q8IX18 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DHX40Q8IX18 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
DHX40Q8IX18 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DHX40Q8IX18 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
DHX40Q8IX18 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.48■■□□□ 1.03
DHX40Q8IX18 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
DHX40Q8IX18 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.48■■□□□ 1.03
DHX40Q8IX18 AC007322.1-201ENST00000426983 750 ntBASIC21.48■■□□□ 1.03
DHX40Q8IX18 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.48■■□□□ 1.03
DHX40Q8IX18 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
DHX40Q8IX18 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.48■■□□□ 1.03
DHX40Q8IX18 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DHX40Q8IX18 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.48■■□□□ 1.03
DHX40Q8IX18 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
DHX40Q8IX18 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
DHX40Q8IX18 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.48■■□□□ 1.03
DHX40Q8IX18 IRX1P1-201ENST00000438849 1838 ntBASIC21.48■■□□□ 1.03
DHX40Q8IX18 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DHX40Q8IX18 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.47■■□□□ 1.03
DHX40Q8IX18 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DHX40Q8IX18 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DHX40Q8IX18 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DHX40Q8IX18 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DHX40Q8IX18 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
DHX40Q8IX18 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DHX40Q8IX18 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
DHX40Q8IX18 AC079598.2-202ENST00000546624 1451 ntBASIC21.47■■□□□ 1.03
DHX40Q8IX18 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.47■■□□□ 1.03
DHX40Q8IX18 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DHX40Q8IX18 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DHX40Q8IX18 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.47■■□□□ 1.03
DHX40Q8IX18 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
DHX40Q8IX18 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.47■■□□□ 1.03
DHX40Q8IX18 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DHX40Q8IX18 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.47■■□□□ 1.03
DHX40Q8IX18 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.47■■□□□ 1.03
DHX40Q8IX18 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DHX40Q8IX18 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DHX40Q8IX18 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DHX40Q8IX18 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.47■■□□□ 1.03
DHX40Q8IX18 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DHX40Q8IX18 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.46■■□□□ 1.03
DHX40Q8IX18 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.46■■□□□ 1.03
DHX40Q8IX18 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
DHX40Q8IX18 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.46■■□□□ 1.03
DHX40Q8IX18 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
DHX40Q8IX18 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
DHX40Q8IX18 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms