Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM48Q8IWZ4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TRIM48Q8IWZ4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
TRIM48Q8IWZ4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.97■□□□□ 0.63
TRIM48Q8IWZ4 REXO1L10P-201ENST00000615707 1290 ntBASIC18.97■□□□□ 0.63
TRIM48Q8IWZ4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.97■□□□□ 0.63
TRIM48Q8IWZ4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TRIM48Q8IWZ4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM48Q8IWZ4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM48Q8IWZ4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM48Q8IWZ4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM48Q8IWZ4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM48Q8IWZ4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM48Q8IWZ4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM48Q8IWZ4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TRIM48Q8IWZ4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM48Q8IWZ4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TRIM48Q8IWZ4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 UNC93B2-201ENST00000285383 730 ntBASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 TSPY15P-201ENST00000457163 923 ntBASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 AC026271.3-201ENST00000571884 352 ntBASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM48Q8IWZ4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM48Q8IWZ4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM48Q8IWZ4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM48Q8IWZ4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
TRIM48Q8IWZ4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM48Q8IWZ4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM48Q8IWZ4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
TRIM48Q8IWZ4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM48Q8IWZ4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM48Q8IWZ4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.95■□□□□ 0.62
TRIM48Q8IWZ4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM48Q8IWZ4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM48Q8IWZ4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM48Q8IWZ4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM48Q8IWZ4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TRIM48Q8IWZ4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 HLA-A-209ENST00000638375 975 ntBASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 FSCN1P1-201ENST00000568912 1481 ntBASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 TCF3P1-201ENST00000423021 1937 ntBASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM48Q8IWZ4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms