Protein–RNA interactions for Protein: Q8IUF1

CBWD2, COBW domain-containing protein 2, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2Q8IUF1 AC233702.5-201ENST00000584107 538 ntBASIC21.04■□□□□ 0.96
CBWD2Q8IUF1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CBWD2Q8IUF1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CBWD2Q8IUF1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CBWD2Q8IUF1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CBWD2Q8IUF1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CBWD2Q8IUF1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CBWD2Q8IUF1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CBWD2Q8IUF1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.04■□□□□ 0.96
CBWD2Q8IUF1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CBWD2Q8IUF1 AL135905.2-201ENST00000584934 1404 ntBASIC21.04■□□□□ 0.96
CBWD2Q8IUF1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 AL032819.2-201ENST00000624543 2162 ntBASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 AC012618.2-201ENST00000428058 849 ntBASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 KSR1P1-201ENST00000446298 240 ntBASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 AC073195.1-201ENST00000607241 877 ntBASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CBWD2Q8IUF1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CBWD2Q8IUF1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CBWD2Q8IUF1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.02■□□□□ 0.96
CBWD2Q8IUF1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CBWD2Q8IUF1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CBWD2Q8IUF1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CBWD2Q8IUF1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CBWD2Q8IUF1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CBWD2Q8IUF1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.02■□□□□ 0.96
CBWD2Q8IUF1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CBWD2Q8IUF1 FAM197Y1-201ENST00000421178 764 ntBASIC21.02■□□□□ 0.96
CBWD2Q8IUF1 AC004980.1-204ENST00000429707 299 ntBASIC21.02■□□□□ 0.96
CBWD2Q8IUF1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.02■□□□□ 0.96
CBWD2Q8IUF1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CBWD2Q8IUF1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.02■□□□□ 0.96
CBWD2Q8IUF1 AL160286.2-201ENST00000567150 934 ntBASIC21.02■□□□□ 0.96
CBWD2Q8IUF1 AC113410.3-201ENST00000623366 203 ntBASIC21.02■□□□□ 0.96
CBWD2Q8IUF1 CR392000.1-201ENST00000624770 1228 ntBASIC21.02■□□□□ 0.96
CBWD2Q8IUF1 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.02■□□□□ 0.96
CBWD2Q8IUF1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.02■□□□□ 0.96
CBWD2Q8IUF1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.02■□□□□ 0.96
CBWD2Q8IUF1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.02■□□□□ 0.96
CBWD2Q8IUF1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.02■□□□□ 0.95
CBWD2Q8IUF1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
CBWD2Q8IUF1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.02■□□□□ 0.95
CBWD2Q8IUF1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.02■□□□□ 0.95
CBWD2Q8IUF1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
CBWD2Q8IUF1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 AL049637.2-201ENST00000641778 930 ntBASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CBWD2Q8IUF1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CBWD2Q8IUF1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CBWD2Q8IUF1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CBWD2Q8IUF1 PPP1R14BP5-201ENST00000440334 435 ntBASIC21■□□□□ 0.95
CBWD2Q8IUF1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21■□□□□ 0.95
CBWD2Q8IUF1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CBWD2Q8IUF1 Z85996.1-201ENST00000494644 937 ntBASIC21■□□□□ 0.95
CBWD2Q8IUF1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CBWD2Q8IUF1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CBWD2Q8IUF1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21■□□□□ 0.95
CBWD2Q8IUF1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21■□□□□ 0.95
CBWD2Q8IUF1 CD177P1-201ENST00000606252 935 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms