Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHFQ7M4L6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHFQ7M4L6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHFQ7M4L6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHFQ7M4L6 AC006333.2-201ENST00000607957 2099 ntBASIC17.48■□□□□ 0.39
SHFQ7M4L6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHFQ7M4L6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHFQ7M4L6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
SHFQ7M4L6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SHFQ7M4L6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.47■□□□□ 0.39
SHFQ7M4L6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.47■□□□□ 0.39
SHFQ7M4L6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHFQ7M4L6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHFQ7M4L6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHFQ7M4L6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
SHFQ7M4L6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SHFQ7M4L6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHFQ7M4L6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SHFQ7M4L6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.47■□□□□ 0.39
SHFQ7M4L6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
SHFQ7M4L6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.47■□□□□ 0.39
SHFQ7M4L6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHFQ7M4L6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHFQ7M4L6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHFQ7M4L6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHFQ7M4L6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHFQ7M4L6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHFQ7M4L6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.47■□□□□ 0.39
SHFQ7M4L6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHFQ7M4L6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.47■□□□□ 0.39
SHFQ7M4L6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHFQ7M4L6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SHFQ7M4L6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHFQ7M4L6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.46■□□□□ 0.39
SHFQ7M4L6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.46■□□□□ 0.39
SHFQ7M4L6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.46■□□□□ 0.39
SHFQ7M4L6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SHFQ7M4L6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SHFQ7M4L6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHFQ7M4L6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHFQ7M4L6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SHFQ7M4L6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.46■□□□□ 0.39
SHFQ7M4L6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SHFQ7M4L6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.46■□□□□ 0.39
SHFQ7M4L6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SHFQ7M4L6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
SHFQ7M4L6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SHFQ7M4L6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SHFQ7M4L6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHFQ7M4L6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHFQ7M4L6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHFQ7M4L6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SHFQ7M4L6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SHFQ7M4L6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHFQ7M4L6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHFQ7M4L6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.45■□□□□ 0.38
SHFQ7M4L6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SHFQ7M4L6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.45■□□□□ 0.38
SHFQ7M4L6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHFQ7M4L6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SHFQ7M4L6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHFQ7M4L6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHFQ7M4L6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHFQ7M4L6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHFQ7M4L6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SHFQ7M4L6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHFQ7M4L6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.45■□□□□ 0.38
SHFQ7M4L6 AL162430.1-201ENST00000480705 870 ntBASIC17.45■□□□□ 0.38
SHFQ7M4L6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.45■□□□□ 0.38
SHFQ7M4L6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.45■□□□□ 0.38
SHFQ7M4L6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.45■□□□□ 0.38
SHFQ7M4L6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.45■□□□□ 0.38
SHFQ7M4L6 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.45■□□□□ 0.38
SHFQ7M4L6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHFQ7M4L6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHFQ7M4L6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHFQ7M4L6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SHFQ7M4L6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHFQ7M4L6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
SHFQ7M4L6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SHFQ7M4L6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
SHFQ7M4L6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SHFQ7M4L6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHFQ7M4L6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHFQ7M4L6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHFQ7M4L6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHFQ7M4L6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHFQ7M4L6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.45■□□□□ 0.38
SHFQ7M4L6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHFQ7M4L6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.44■□□□□ 0.38
SHFQ7M4L6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHFQ7M4L6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.44■□□□□ 0.38
SHFQ7M4L6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHFQ7M4L6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SHFQ7M4L6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SHFQ7M4L6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SHFQ7M4L6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.44■□□□□ 0.38
SHFQ7M4L6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHFQ7M4L6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHFQ7M4L6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms