Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COLCA1Q6ZS62 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
COLCA1Q6ZS62 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
COLCA1Q6ZS62 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COLCA1Q6ZS62 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLCA1Q6ZS62 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COLCA1Q6ZS62 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLCA1Q6ZS62 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLCA1Q6ZS62 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLCA1Q6ZS62 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
COLCA1Q6ZS62 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLCA1Q6ZS62 KRT18P29-201ENST00000397031 1267 ntBASIC16.66■□□□□ 0.26
COLCA1Q6ZS62 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
COLCA1Q6ZS62 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.66■□□□□ 0.26
COLCA1Q6ZS62 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
COLCA1Q6ZS62 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.66■□□□□ 0.26
COLCA1Q6ZS62 AL445675.2-201ENST00000620291 557 ntBASIC16.66■□□□□ 0.26
COLCA1Q6ZS62 AL359736.2-201ENST00000621992 437 ntBASIC16.66■□□□□ 0.26
COLCA1Q6ZS62 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.66■□□□□ 0.26
COLCA1Q6ZS62 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLCA1Q6ZS62 LINC01465-201ENST00000408887 1940 ntBASIC16.66■□□□□ 0.26
COLCA1Q6ZS62 AC018445.3-201ENST00000624177 1945 ntBASIC16.66■□□□□ 0.26
COLCA1Q6ZS62 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLCA1Q6ZS62 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLCA1Q6ZS62 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLCA1Q6ZS62 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 PRORSD1P-201ENST00000295112 541 ntBASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
COLCA1Q6ZS62 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
COLCA1Q6ZS62 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.64■□□□□ 0.26
COLCA1Q6ZS62 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
COLCA1Q6ZS62 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 NIFKP9-201ENST00000419265 221 ntBASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 RARRES2P10-201ENST00000564312 460 ntBASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
COLCA1Q6ZS62 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 HTR7P1-201ENST00000538670 1336 ntBASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms