Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SHC4Q6S5L8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHC4Q6S5L8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SHC4Q6S5L8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHC4Q6S5L8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHC4Q6S5L8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.84■■□□□ 1.09
SHC4Q6S5L8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHC4Q6S5L8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
SHC4Q6S5L8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHC4Q6S5L8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHC4Q6S5L8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHC4Q6S5L8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHC4Q6S5L8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHC4Q6S5L8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
SHC4Q6S5L8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.83■■□□□ 1.09
SHC4Q6S5L8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHC4Q6S5L8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHC4Q6S5L8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHC4Q6S5L8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
SHC4Q6S5L8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHC4Q6S5L8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SHC4Q6S5L8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SHC4Q6S5L8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.83■■□□□ 1.09
SHC4Q6S5L8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.83■■□□□ 1.09
SHC4Q6S5L8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.83■■□□□ 1.09
SHC4Q6S5L8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.83■■□□□ 1.09
SHC4Q6S5L8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.83■■□□□ 1.09
SHC4Q6S5L8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHC4Q6S5L8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SHC4Q6S5L8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SHC4Q6S5L8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.08
SHC4Q6S5L8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.83■■□□□ 1.08
SHC4Q6S5L8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SHC4Q6S5L8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 IRX1P1-201ENST00000438849 1838 ntBASIC21.82■■□□□ 1.08
SHC4Q6S5L8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHC4Q6S5L8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SHC4Q6S5L8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHC4Q6S5L8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHC4Q6S5L8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.81■■□□□ 1.08
SHC4Q6S5L8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.81■■□□□ 1.08
SHC4Q6S5L8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SHC4Q6S5L8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SHC4Q6S5L8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SHC4Q6S5L8 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.81■■□□□ 1.08
SHC4Q6S5L8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.81■■□□□ 1.08
SHC4Q6S5L8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.81■■□□□ 1.08
SHC4Q6S5L8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
SHC4Q6S5L8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHC4Q6S5L8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.81■■□□□ 1.08
SHC4Q6S5L8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SHC4Q6S5L8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms