Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AP002982.1-201ENST00000492365 877 ntBASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39BQ5VTQ0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TTC39BQ5VTQ0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TTC39BQ5VTQ0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TTC39BQ5VTQ0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TTC39BQ5VTQ0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TTC39BQ5VTQ0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TTC39BQ5VTQ0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.15■□□□□ 0.82
TTC39BQ5VTQ0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TTC39BQ5VTQ0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TTC39BQ5VTQ0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TTC39BQ5VTQ0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TTC39BQ5VTQ0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TTC39BQ5VTQ0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.15■□□□□ 0.82
TTC39BQ5VTQ0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TTC39BQ5VTQ0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
TTC39BQ5VTQ0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TTC39BQ5VTQ0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TTC39BQ5VTQ0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.14■□□□□ 0.81
TTC39BQ5VTQ0 NIFKP9-201ENST00000419265 221 ntBASIC20.14■□□□□ 0.81
TTC39BQ5VTQ0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.14■□□□□ 0.81
TTC39BQ5VTQ0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.14■□□□□ 0.81
TTC39BQ5VTQ0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.14■□□□□ 0.81
TTC39BQ5VTQ0 AC073195.1-201ENST00000607241 877 ntBASIC20.14■□□□□ 0.81
TTC39BQ5VTQ0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TTC39BQ5VTQ0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
TTC39BQ5VTQ0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TTC39BQ5VTQ0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TTC39BQ5VTQ0 AC098818.2-201ENST00000564925 2320 ntBASIC20.14■□□□□ 0.81
TTC39BQ5VTQ0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
TTC39BQ5VTQ0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TTC39BQ5VTQ0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.13■□□□□ 0.81
TTC39BQ5VTQ0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.13■□□□□ 0.81
TTC39BQ5VTQ0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.13■□□□□ 0.81
TTC39BQ5VTQ0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TTC39BQ5VTQ0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TTC39BQ5VTQ0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TTC39BQ5VTQ0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TTC39BQ5VTQ0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TTC39BQ5VTQ0 AL020996.1-203ENST00000536896 2307 ntBASIC20.13■□□□□ 0.81
TTC39BQ5VTQ0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TTC39BQ5VTQ0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TTC39BQ5VTQ0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TTC39BQ5VTQ0 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.13■□□□□ 0.81
TTC39BQ5VTQ0 MIR4497-201ENST00000583208 89 ntBASIC20.13■□□□□ 0.81
TTC39BQ5VTQ0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.13■□□□□ 0.81
TTC39BQ5VTQ0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TTC39BQ5VTQ0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.13■□□□□ 0.81
TTC39BQ5VTQ0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 AC005332.7-201ENST00000614046 2005 ntBASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 KRT8P8-201ENST00000434750 1448 ntBASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 KSR1P1-201ENST00000446298 240 ntBASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 AC113410.3-201ENST00000623366 203 ntBASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 TREX1-205ENST00000625293 1783 ntBASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TTC39BQ5VTQ0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TTC39BQ5VTQ0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TTC39BQ5VTQ0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
TTC39BQ5VTQ0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TTC39BQ5VTQ0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TTC39BQ5VTQ0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.11■□□□□ 0.81
TTC39BQ5VTQ0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TTC39BQ5VTQ0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.11■□□□□ 0.81
TTC39BQ5VTQ0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TTC39BQ5VTQ0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.11■□□□□ 0.81
TTC39BQ5VTQ0 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.11■□□□□ 0.81
TTC39BQ5VTQ0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
TTC39BQ5VTQ0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms